{bio}[foss/2023a] lil-aretomo v0.1.1 by ThomasHoffmann77 · Pull Request #20696 · easybuilders/easybuild-easyconfigs

ThomasHoffmann77 · 2024-05-31T11:05:25Z

(created using eb --new-pr)

verdurin · 2024-06-04T15:07:32Z

Test report by @verdurin
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/c99fa72e9cb09a992760d2487def9602 for a full test report.

verdurin · 2024-06-04T15:08:13Z

@boegelbot please test @ generoso

boegelbot · 2024-06-04T15:10:10Z

@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=20696 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20696 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 13625

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
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boegelbot · 2024-06-04T15:11:53Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns3 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/9a203e195d1e4bc014c9bb274e6909e9 for a full test report.

verdurin · 2024-06-04T16:55:43Z

@boegelbot please test @ jsc-zen3

boegelbot · 2024-06-04T17:00:16Z

@verdurin: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20696 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20696 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 4278

Test results coming soon (I hope)...

Details

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-06-04T17:01:04Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.4, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/9023f7c18406c875a280ac79969f016f for a full test report.

…3.patch

…3a.eb

verdurin · 2024-06-05T13:40:53Z

Test report by @verdurin
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/17df587d76480889b5c973d0da214c61 for a full test report.

verdurin · 2024-06-05T13:42:28Z

@boegelbot please test @ generoso

boegelbot · 2024-06-05T13:45:09Z

@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=20696 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20696 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 13640

Test results coming soon (I hope)...

Details

- notification for comment with ID 2149985092 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-06-05T13:46:40Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns3 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/de7fd4f863b6c90d345e6763ef640b7e for a full test report.

verdurin · 2024-06-05T15:19:42Z

@boegelbot please test @ jsc-zen3

boegelbot · 2024-06-05T15:20:08Z

@verdurin: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20696 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20696 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 4288

Test results coming soon (I hope)...

Details

- notification for comment with ID 2150339703 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-06-05T15:21:01Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.4, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/3cf9c1f3dac444059567017da7d0c7e1 for a full test report.

easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-2023a.eb

…3a.eb Co-authored-by: Adam Huffman <verdurin@users.noreply.github.com>

easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-2023a.eb

… default used by PythonBundle

boegel

lgtm

boegel · 2024-06-08T07:22:56Z

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3117.skitty.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/boegel/c309fee6005597a8a3d423401c60aaae for a full test report.

requested changes made

boegel · 2024-06-08T07:40:24Z

Going in, thanks @ThomasHoffmann77!

{bio}[foss/2023a] lil-aretomo v0.1.0

c2cebdb

ThomasHoffmann77 mentioned this pull request May 31, 2024

RELION5 draft for tomo support; 2nd try jfgrimm/easybuild-easyconfigs#6

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20 tasks

verdurin added the new label Jun 4, 2024

ThomasHoffmann77 marked this pull request as draft June 5, 2024 09:39

ThomasHoffmann77 and others added 3 commits June 5, 2024 11:44

update 0.1.1

fbe5fda

Delete easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.0_exec_pr4…

f7c0f31

…3.patch

Delete easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.0-foss-202…

2e08775

…3a.eb

ThomasHoffmann77 changed the title ~~{bio}[foss/2023a] lil-aretomo v0.1.0~~ {bio}[foss/2023a] lil-aretomo v0.1.1 Jun 5, 2024

ThomasHoffmann77 marked this pull request as ready for review June 5, 2024 09:51

verdurin added this to the release after 4.9.1 milestone Jun 5, 2024

verdurin previously requested changes Jun 5, 2024

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easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-2023a.eb Outdated Show resolved Hide resolved

Update easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-202…

b9b0bf3

…3a.eb Co-authored-by: Adam Huffman <verdurin@users.noreply.github.com>

boegel requested changes Jun 8, 2024

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easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-2023a.eb Outdated Show resolved Hide resolved

easybuild/easyconfigs/l/lil-aretomo/lil-aretomo-0.1.1-foss-2023a.eb Outdated Show resolved Hide resolved

remove sanity_check_paths for lil-aretomo since it's identical to the…

ff40e6c

… default used by PythonBundle

boegel approved these changes Jun 8, 2024

View reviewed changes

boegel merged commit 3f74a17 into easybuilders:develop Jun 8, 2024

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