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{bio}[gfbf/2023a] morphosamplers v0.0.16#20609

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Crivella merged 7 commits intoeasybuilders:developfrom
ThomasHoffmann77:20240523121622_new_pr_morphosamplers0011
Sep 4, 2025
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{bio}[gfbf/2023a] morphosamplers v0.0.16#20609
Crivella merged 7 commits intoeasybuilders:developfrom
ThomasHoffmann77:20240523121622_new_pr_morphosamplers0011

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(created using eb --new-pr)

@ThomasHoffmann77 ThomasHoffmann77 marked this pull request as draft May 23, 2024 10:16
@ThomasHoffmann77 ThomasHoffmann77 changed the title {bio}[gfbf/2023a] mophosamplers v0.0.11 {bio}[gfbf/2023a] morphosamplers v0.0.11 May 23, 2024
@ThomasHoffmann77 ThomasHoffmann77 marked this pull request as ready for review May 24, 2024 08:46
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verdurin commented Jun 5, 2024

Test report by @verdurin
SUCCESS
Build succeeded for 2 out of 2 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/5f2795766e10e75fe80b2898ca2de1a9 for a full test report.

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verdurin commented Jun 5, 2024

@boegelbot please test @ generoso

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@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=20609 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20609 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 13647

Test results coming soon (I hope)...

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/b5cb1a0788842fdd2268511ad3edade2 for a full test report.

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@ThomasHoffmann77 You might want to sync your PR with development, something like this:

eb --sync-pr-with-develop NUMBER_OF_PR

Also, we already have morphosamplers-0.0.10-gfbf-2023a.eb merged in EasyBuild-5.1.0.

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github-actions bot commented Jun 17, 2025

Updated software morphosamplers-0.0.16-gfbf-2023a.eb

Diff against morphosamplers-0.0.10-gfbf-2023a.eb

easybuild/easyconfigs/m/morphosamplers/morphosamplers-0.0.10-gfbf-2023a.eb

diff --git a/easybuild/easyconfigs/m/morphosamplers/morphosamplers-0.0.10-gfbf-2023a.eb b/easybuild/easyconfigs/m/morphosamplers/morphosamplers-0.0.16-gfbf-2023a.eb
index 813823d5d6..b6dcc15c9b 100644
--- a/easybuild/easyconfigs/m/morphosamplers/morphosamplers-0.0.10-gfbf-2023a.eb
+++ b/easybuild/easyconfigs/m/morphosamplers/morphosamplers-0.0.16-gfbf-2023a.eb
@@ -1,8 +1,8 @@
-# Thomas Hoffmann, EMBL Heidelberg, structures-it@embl.de, 2024/02
+# Thomas Hoffmann, EMBL Heidelberg, structures-it@embl.de, 2025/05
 easyblock = 'PythonBundle'
 
 name = 'morphosamplers'
-version = '0.0.10'
+version = '0.0.16'
 
 homepage = 'https://github.com/kevinyamauchi/morphosamplers'
 description = """
@@ -28,13 +28,11 @@ exts_list = [
     ('psygnal', '0.9.5', {
         'checksums': ['4956ea6c36a75f7fc457558935b67dd8be2594661b4d08eeb3357d69c509c55f'],
     }),
+    ('pydantic_compat', '0.1.2', {
+        'checksums': ['c5c5bca39ca2d22cad00c02898e400e1920e5127649a8e860637f15566739373'],
+    }),
     (name, version, {
-        'patches': ['morphosamplers-0.0.10_bump_pydantic2.patch'],  # allow using pydantic2
-        'checksums': [
-            {'morphosamplers-0.0.10.tar.gz': '52dcfaa0e9fe75112f53cc8bc9a08307f500d5a2422f43192c1e68f6a24f9cae'},
-            {'morphosamplers-0.0.10_bump_pydantic2.patch':
-             '4b9590fac69a57ace54f489258ee6d52040e22a442eefac418b76818aefa47a9'},
-        ],
+        'checksums': ['82097605e42f2129445ef4ac2235430ac10d1ec6dced918bfacc58d913377f58'],
     }),
 ]
 

@ThomasHoffmann77 ThomasHoffmann77 changed the title {bio}[gfbf/2023a] morphosamplers v0.0.11 {bio}[gfbf/2023a] morphosamplers v0.0.16 Jun 17, 2025
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@boegelbot please test @ jsc-zen3

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@sassy-crick: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20609 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20609 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 6848

Test results coming soon (I hope)...

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c4.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/f0f1395bd8b916a61758fd16adf2fb4a for a full test report.

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Crivella commented Sep 4, 2025

Test report by @Crivella
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
crivella-desktop - Linux Ubuntu 22.04.5 LTS (Jammy Jellyfish), x86_64, 13th Gen Intel(R) Core(TM) i9-13900K (skylake), Python 3.11.13
See https://gist.github.com/Crivella/16370319bb70bf3a625e7f6125123171 for a full test report.

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LGTM

@Crivella Crivella added this to the next release (5.1.2) milestone Sep 4, 2025
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Crivella commented Sep 4, 2025

Going in, thanks @ThomasHoffmann77!

@Crivella Crivella merged commit 8aa5564 into easybuilders:develop Sep 4, 2025
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5 participants