{bio}[foss/2022a] CellChat v1.5.0 w/ Python 3.10.4

easybuild/easyconfigs/c/CellChat/CellChat-1.5.0-foss-2022a.eb

@@ -0,0 +1,56 @@
+easyblock = 'Bundle'
+
+name = 'CellChat'
+version = '1.5.0'
+
+homepage = 'https://github.com/sqjin/CellChat'
+description = """"
+R toolkit for inference, visualization and analysis of cell-cell communication
+from single-cell data"""
+
+toolchain = {'name': 'foss', 'version': '2022a'}
+
+dependencies = [
+    ('R', '4.2.1'),
+    ('R-bundle-Bioconductor', '3.15', '-R-%(rver)s'),
+    ('Python', '3.10.4'),
+    ('SciPy-bundle', '2022.05'),
+    ('umap-learn', '0.5.3'),
+]
+
+exts_defaultclass = 'RPackage'
+exts_default_options = {
+    'sources': ['%(name)s_%(version)s.tar.gz'],
+    'source_urls': [
+        'https://cran.r-project.org/src/contrib/Archive/%(name)s',  # package archive
+        'https://cran.r-project.org/src/contrib/',  # current version of packages
+        'https://cran.freestatistics.org/src/contrib',  # mirror alternative for current packages
+    ],
+}
+
+exts_list = [
+    ('ggalluvial', '0.12.5', {
+        'checksums': ['90044c880e70096137a733d601b11e558fe55e4e7d3aaacac6f08d7847415d71'],
+    }),
+    ('systemfonts', '1.0.4', {
+        'checksums': ['ef766c75b942f147d382664a00d6a4930f1bfe0cce9d88943f571682a85a84c0'],
+    }),
+    ('svglite', '2.1.1', {
+        'checksums': ['48700169eec1b05dbee9e2bae000aa84c544617b018cb3ac431a128cfd8dac56'],
+    }),
+    (name, version, {
+        'preinstallopts': "rm src/*.o src/*.so && ",
+        'source_urls': ['https://github.com/sqjin/CellChat/archive/'],
+        'sources': ['v%(version)s.tar.gz'],
+        'checksums': ['c9e31327cbbcf1fec5e6d8a0dfe011ded8e543557107e93dd4a417c4c137d1c6'],
+    }),
+]
+
+sanity_check_paths = {
+    'files': [],
+    'dirs': [name],
+}
+
+modextrapaths = {'R_LIBS_SITE': ''}
+
+moduleclass = 'bio'