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Still problems with json encode in Py3 (Py2 is fine)
Issues with np.int64 not being JSON-serializable; must explicitly convert.
Also std'ized names _atom_contacts & _residue_contacts
dwhswenson
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Serializing objects will facilitate task-based parallelization. This provides serialization to Python dicts or to JSON strings.
ContactMap(with tests)ContactFrequency(with tests)ContactDifference(with tests)NOTE: One limitation (as of the current implementation) is that subclasses (or duck-punched versions) of contact objects cannot be stored as the components of a
ContactDifference. In the future, I may try to allow subclasses, but you can't count on duck-typing to work.