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SpecHLA v1.0.6

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@wshuai294 wshuai294 released this 14 Jun 11:46
· 4 commits to master since this release
  • add --db to denote database dir by Redmar-van-den-Berg
  • Set index.sh script to exit immediately on failure by Redmar-van-den-Berg
  • add --minimap_index to construct minimap2 index and reduce memory usage in mapping for long_read_typing.py
  • set max depth for long_read_typing.py
  • add --strand_bias_pvalue_cutoff for longshot in long_read_typing.py
  • convert sam to bam in long_read_typing.py