Web-app to explore Mycobacterium tuberculosis complex

Description

TB gen is a web application created for keeping curated Mycobacterium tuberculosis complex (MTBC) reference dataset, and set of barcoding SNPs for reliable genotyping.

Installation and Usage

The app can be accessed through Streamlit Cloud

Alternatively it can be installed locally:

1. Clone TB-gen repository:

git clone https://github.com/dbespiatykh/TB-gen.git

2. Install required dependencies:

pip install -r requirements.txt

3. Run the app:

streamlit run streamlit_app.py

License