PlantCV image analysis scripts used in Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, et al. A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria. Mol Plant. 2015;8: 1520–1535.
The PlantCV release used for the above manuscript was v1.0. For example:
git clone --branch v1.0 https://github.com/danforthcenter/plantcv.git
The scripts used for image analysis are contained in image_analysis_scripts
Scripts for statistical analysis are contained in analysis_scripts