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19 Open 7 Closed
19 Open 7 Closed
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Issues list

bump biahub to python 3.11
#66 opened Apr 1, 2025 by edyoshikun
Use 3D phase cross correlation for 3D stabilization
#65 opened Apr 1, 2025 by ieivanov
2
Move biahub deconvolve to waveorder
#63 opened Mar 26, 2025 by talonchandler
2
test that concatenate write the correct data
#60 opened Mar 16, 2025 by ieivanov
concatenate should not allow duplicate position inputs
#59 opened Mar 16, 2025 by ieivanov
7
Stabilization refactoring
#54 opened Mar 8, 2025 by edyoshikun
1 task
Restructure biahub
#52 opened Mar 6, 2025 by ieivanov biahub 0.1.0
1
@ieivanov
6
Duplicate channels with zero values during registration bug Something isn't working registration Spatial registration between volumes
#50 opened Feb 28, 2025 by Soorya19Pradeep
@edyoshikun @Soorya19Pradeep
2
decide where to version visualization CLI: biahub or napari-iohub
#45 opened Feb 8, 2025 by mattersoflight
@edyoshikun @ieivanov
@tayllatheodoro @ziw-liu
1
add depedencies required for viewing and exporting overlays of images.
#44 opened Feb 8, 2025 by mattersoflight
Create a shared biahub environment for processing and QC of datasets
#43 opened Feb 8, 2025 by mattersoflight
@tayllatheodoro
Unify registration and stabilization pipelines
#38 opened Jan 22, 2025 by ieivanov
Transitioning to using iohub.ngff.units.create_empty_plate
#37 opened Jan 22, 2025 by ieivanov biahub 0.1.0
characterize-psf fails on 37 GB daxi2 volume
#34 opened Jan 11, 2025 by talonchandler
1
2
Improving stabilization over time like autotracker
#28 opened Dec 6, 2024 by edyoshikun
Cannot estimate registration bug Something isn't working
#22 opened Nov 26, 2024 by ziw-liu
6
Memory leak in multi-processing?
#20 opened Nov 26, 2024 by ziw-liu
Make target store in estimate-registration optional enhancement New feature or request registration Spatial registration between volumes
#7 opened Sep 26, 2024 by ziw-liu
Fix stabilization arguments
#4 opened Sep 20, 2024 by edyoshikun
1
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