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66 Open 55 Closed
66 Open 55 Closed
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Issues list

Questions about environment management with CytoTable and ForkProcess error question Further information is requested
#227 opened Sep 18, 2024 by arka2696
5
Installation may hang for long periods during dependency resolutions for boto3 or botocore enhancement New feature or request
#224 opened Sep 3, 2024 by d33bs
Reduce join operation memory consumption enhancement New feature or request
#223 opened Sep 1, 2024 by d33bs
Make root cause exceptions more visible through customized handling and/or logging enhancement New feature or request
#222 opened Sep 1, 2024 by d33bs
Issue Running in Jupyter Notebook for convert_parquet Function question Further information is requested
#221 opened Aug 7, 2024 by sarakh1999
1
Update CITATION.cff with contributors enhancement New feature or request
#219 opened Jul 30, 2024 by d33bs
Set temporary cache locations of dependencies from one location enhancement New feature or request
#218 opened Jul 22, 2024 by d33bs
Possible Parsl manager persistence after CytoTable processing bug Something isn't working
#211 opened Jun 25, 2024 by d33bs
Add timeout for large directory parsing in source processing enhancement New feature or request
#209 opened Jun 13, 2024 by d33bs
Extract or somehow store data from CellProfiler experiment tables in CytoTable output enhancement New feature or request
#203 opened Apr 26, 2024 by d33bs
Retain extracted, unjoined table output when joining data in CytoTable enhancement New feature or request
#202 opened Apr 26, 2024 by d33bs
Define ideal compartment and metadata table relationships for joins to avoid returning NA results enhancement New feature or request
#201 opened Apr 26, 2024 by d33bs
Provide data statistics report as part of CytoTable output enhancement New feature or request
#200 opened Apr 26, 2024 by d33bs
1
Enable _concat_source_group single file pass-through to avoid rewrites enhancement New feature or request
#191 opened Apr 16, 2024 by d33bs
Add capability to sample source datasets by percent or rowcount to increase speed of testing enhancement New feature or request
#190 opened Apr 16, 2024 by d33bs
Consistently handle Metadata_Well and Metadata_Plate column renaming and join specification enhancement New feature or request
#189 opened Apr 16, 2024 by d33bs
Verify how large floating-point numbers are exported question Further information is requested
#187 opened Apr 12, 2024 by d33bs
@d33bs
2
Add SBOM file to repository enhancement New feature or request
#185 opened Apr 11, 2024 by d33bs
Use OpenLineage API (or other similar tooling) as basis for CytoTable Paquet metadata output enhancement New feature or request
#180 opened Mar 29, 2024 by d33bs
Document Parsl SlurmProvider usage for CU Alpine HPC documentation Improvements or additions to documentation enhancement New feature or request
#179 opened Mar 27, 2024 by d33bs
Distinguish between joined and unjoined concatenation enhancement New feature or request
#178 opened Mar 27, 2024 by d33bs
1
@d33bs
Explore pyarrow parquet write_dataset enhancement New feature or request
#177 opened Mar 27, 2024 by d33bs
Outline the best settings for Parsl configuration with CytoTable enhancement New feature or request
#176 opened Mar 26, 2024 by d33bs
@d33bs
7
Update to remove Python 3.8 support (~October 2024) enhancement New feature or request
#171 opened Mar 18, 2024 by d33bs
WorkerLost: Task failure due to loss of worker Failure during join data creation using HTE Parsl config with SQ00014613.sqlite bug Something isn't working
#169 opened Mar 15, 2024 by d33bs
ProTip! Exclude everything labeled bug with -label:bug.