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correct R script - ngsupload.qmd
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yeroslaviz committed Nov 28, 2024
1 parent 6820260 commit a3762df
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127 changes: 84 additions & 43 deletions docs/ngsupload.html

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4 changes: 2 additions & 2 deletions ngsupload.qmd
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Expand Up @@ -137,8 +137,8 @@ Specifies the number of used threads for uploading NGS data.
`HTSeq-count` [@anders2014] is part of the HTSeq suite, a python library to facilitate and represent data, such as genomic coordinates, sequences, sequencing reads, alignments, gene model information and variant calls. `htseq-count` can be used to pre-processes RNA-Seq data for differential expression analysis by counting the overlap of reads with genes. To recreate the plot, one can download the data table below [@downloadthis]

```{r}
#| echo: false
#| eval: true
#| echo: true
#| eval: false
# remotes::install_github("fmmattioni/downloadthis")
library(downloadthis)
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