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pangolin v2.4.2
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@aineniamh aineniamh released this 05 May 11:54
· 445 commits to master since this release
v.2.4.2
f12db4c

Release notes

  • Update to minimap2 call to exclude secondary chains from output sam
minimap2 -a -x asm5 --sam-hit-only --secondary=no -t  {workflow.cores} {input.reference:q} '{input.fasta}'
  • Bug fix from issue #184 where the case of all sequences failing quality control didn't match output of successful run.
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