Skip to content

Commit

Permalink
Update lineage_notes.txt (#2108)
Browse files Browse the repository at this point in the history
  • Loading branch information
Memorablea authored Jul 18, 2023
1 parent 45a4f84 commit 7507cc9
Showing 1 changed file with 8 additions and 8 deletions.
16 changes: 8 additions & 8 deletions lineage_notes.txt
Original file line number Diff line number Diff line change
Expand Up @@ -1421,12 +1421,12 @@ EW.3 Alias of B.1.1.529.5.3.1.1.1.1.1.1.38.3 S:A348S, South Africa
BQ.1.1.39 Alias of B.1.1.529.5.3.1.1.1.1.1.1.39 found mainly in England, Singapore and Canada, from pango-designation issue #1385
FQ.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.39.1, found mainly in Sweden, France and Australia, from pango-designation issue #1797
BQ.1.1.40 Alias of B.1.1.529.5.3.1.1.1.1.1.1.40 Canada, defined by N:T24I
BQ.1.1.41 Alias of B.1.1.529.5.3.1.1.1.1.1.1.41 USA, defined by S:K182I
BQ.1.1.41 Alias of B.1.1.529.5.3.1.1.1.1.1.1.41 USA, defined by S:K182I,from #1291
BQ.1.1.42 Alias of B.1.1.529.5.3.1.1.1.1.1.1.42 France, defined by S:S704L
BQ.1.1.43 Alias of B.1.1.529.5.3.1.1.1.1.1.1.43 USA, S:Q613H (C26292T)
EZ.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.43.1 Portugal, S:S247N, S:Y248S
BQ.1.1.44 Alias of B.1.1.529.5.3.1.1.1.1.1.1.44 S:D253G
BQ.1.1.45 Alias of B.1.1.529.5.3.1.1.1.1.1.1.45 Europe, S:Y248D
BQ.1.1.45 Alias of B.1.1.529.5.3.1.1.1.1.1.1.45 Europe, S:Y248D,from #1512
BQ.1.1.46 Alias of B.1.1.529.5.3.1.1.1.1.1.1.46 France, S:F157L
EN.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.46.1 France, S:V1264L, from #1696
EN.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.46.1.1 S:M153I, France
Expand Down Expand Up @@ -2749,7 +2749,7 @@ XBB.1.5.49 T6886C, USA
XBB.1.5.50 S:621S, N:T49I, USA/Canada
XBB.1.5.51 ORF1a:D3009A, USA
XBB.1.5.52 C3589T
XBB.1.5.53 S:F140I, S:L582F, S:R403K, South Africa
XBB.1.5.53 S:F140I, S:L582F, S:R403K, South Africa,from #1804
XBB.1.5.54 C14358T,C20016T,C29311T, Central/Eastern Europe
XBB.1.5.55 ORF1a:T3356I, USA/Canada
XBB.1.5.56 S:A852S, USA
Expand Down Expand Up @@ -2896,8 +2896,8 @@ XBB.1.9.5 ORF1a:D629E, Russia
XBB.1.9.6 S:403K, S:570T, Indonesia
XBB.1.9.7 S:486P, S:478R, ORF1a:P1018T, Indonesia
XBB.1.10 USA/Japan, S:A852V, S:R403K
XBB.1.11 Indonesia/Malaysia/Singapore/US, C13968A and G16377A
XBB.1.11.1 Indonesia/Malaysia/Singapore, S:S486P
XBB.1.11 Indonesia/Malaysia/Singapore/US, C13968A and G16377A,from #1490
XBB.1.11.1 Indonesia/Malaysia/Singapore, S:S486P,from #1490
FP.1 Alias of XBB.1.11.1.1, A6616G, C21642T, following ORF1a:T2016I, Singapore, from #1847
FP.2 Alias of XBB.1.11.1.2, S:F186S, ORF1a:V3078I, Indonesia/Malaysia/Singapore
FP.2.1 Alias of XBB.1.11.1.2.1, S:478R, ORF1a:I693T, ORF1a:T951A, ORF3a:W149C, Indonesia
Expand Down Expand Up @@ -2955,7 +2955,7 @@ FE.1.1.3 Alias of XBB.1.18.1.1.1.3, A24775G, China
FE.1.1.4 Alias of XBB.1.18.1.1.1.4, A4336G, T24073C, Brazil
FE.1.2 Alias of XBB.1.18.1.1.2, A5488G
XBB.1.19 Defined by S:486P, C541T, A10042G, T21363C, pre ORF8:8*, Pakistan, from #1680
XBB.1.19.1 Defined by S:E554K
XBB.1.19.1 Defined by S:E554K,from #1765
GW.1 Alias of XBB.1.19.1.1, ORF1a:D264N, N:M322V, China, from sars-cov-2-variants/lineage-proposals#157
GW.2 Alias of XBB.1.19.1.2, S:D936G, USA
XBB.1.20 Defined by C541T, ORF3a:A72V, ORF1a:P4312T, pre ORF8:8*, Malaysia
Expand Down Expand Up @@ -3023,7 +3023,7 @@ XBB.1.49 S:346S, S:486P, on C16648A, A27965G, pre ORF8:8* branch with XBB.1.33,
XBB.2 Defined by S:D253G, from issue #1173
XBB.2.1 Defined by S:N764R (C23853G), two step mutation on top of C23854A (S:N764K defining of all Omicrons)
XBB.2.2 Defined by S:Q613H
XBB.2.3 Defined by S:P521S and S:S486P, India/Indonesia/Singapore/USA
XBB.2.3 Defined by S:P521S and S:S486P, India/Indonesia/Singapore/USA,from #1603 and #1535
XBB.2.3.1 S:D80Y, England/Sweden/India, #1775
XBB.2.3.2 S:G184V, ORF1a:R2159W, India, from #1776
HH.1 Alias of XBB.2.3.2.1, ORF1a:T2977I, T20697C
Expand Down Expand Up @@ -3052,7 +3052,7 @@ GS.1 Alias of XBB.2.3.11.1, S:213D, C4582T, C25075T, Australia, from #2023
XBB.2.3.12 S:S494P, from #2029
XBB.2.3.13 ORF1a:T1822I, Spain
XBB.2.3.14 ORF1a:Q998H
XBB.2.4 Defined by S:S486P, Spain/Denmark/Germany
XBB.2.4 Defined by S:S486P, Spain/Denmark/Germany,from #1603 and #1518
XBB.2.5 S:Q613H, from https://github.com/jmcbroome/auto-pango-designation/pull/193
XBB.2.6 Mostly Peru, C5144T, T5731A
XBB.2.6.1 S:P521S, Peru, from #1869
Expand Down

0 comments on commit 7507cc9

Please sign in to comment.