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Issues list

Census schema version incorrect bug Something isn't working
#1384 opened Mar 31, 2025 by ivirshup
2 tasks
Doc updates for disease terms with schema 6.0 tech
#1379 opened Mar 26, 2025 by ivirshup
2 tasks
Add a release / pip package for Python 3.13? user request
#1374 opened Mar 18, 2025 by semenko
1
4
Incorrect number of donors in census["census_info"]["summary"] bug Something isn't working
#1373 opened Mar 17, 2025 by ivirshup
1
Fix flaky text fixture in builder tech
#1372 opened Mar 13, 2025 by ivirshup
Census Spatial must be updated to support new Visium versions 5.3 Next minor CELLxGENE schema version after 5.2
#1364 opened Mar 3, 2025 by brianraymor
3 tasks
Census Spatial 2025 Q1 epic tech
#1360 opened Feb 21, 2025 by brianraymor
3 of 4 tasks
API equivalence across spatial and single cell spatial user request
#1359 opened Feb 21, 2025 by ivirshup
5 tasks
is the published geneformer for census 2024-07-01 fine-tuned bug Something isn't working
#1355 opened Feb 12, 2025 by vtrifonov-altos
2
ExperimentDataPipe workers don't seem to share memory bug Something isn't working
#1353 opened Feb 10, 2025 by yanwu2014
Add cell culture data to Census user request
#1341 opened Jan 22, 2025 by pablo-gar-insitro
2
[FEATURE REQUEST] Add flag overwrite to download_source_h5ad user request
#1324 opened Dec 22, 2024 by canergen
Specify the Census search space with an obs_value_filter parameter in find_nearest_obs P0 Priority 0 - Critical, fix ASAP! Priority backlog items user request
#1305 opened Oct 23, 2024 by pablo-gar
1
Social previews for the docsite documentation Improvements or additions to documentation python api Related to the API user request
#1295 opened Oct 2, 2024 by ivirshup
[R] Remove tiledb dependency for R package r api tech
#1274 opened Sep 5, 2024 by ivirshup
2 tasks
1
Network Issue FAQs documentation Improvements or additions to documentation network P1 Priority 1 - Improvement with wide impact, fix within 1 week
#1265 opened Aug 19, 2024 by cathystoli
@ivirshup
1
tools/census_contrib/pyproject.toml is super out of date bug Something isn't working P2 Priority 2 - Improvement with narrower impact, fix within a month
#1254 opened Jul 30, 2024 by ivirshup
@ivirshup
Add function for listing available h5ads for download Priority backlog items python api Related to the API r api user request
#1251 opened Jul 24, 2024 by ivirshup
3
[misc] user-agent tagging in R analytics Work relating to analytics support r api
#1249 opened Jul 22, 2024 by pablo-gar
4 tasks
Execution Time for highly_variable_genes Function performance
#1242 opened Jul 12, 2024 by ckrilow
2
Add live Census tests for PyTorch loaders P1 Priority 1 - Improvement with wide impact, fix within 1 week pytorch tileDB work
#1222 opened Jul 3, 2024 by ebezzi
[pytorch] Add encoders for X P0 Priority 0 - Critical, fix ASAP! pytorch tileDB work user request
#1219 opened Jul 1, 2024 by ebezzi
1
embeddings functions do not support same values for organisms as main API bug Something isn't working effort-xs P2 Priority 2 - Improvement with narrower impact, fix within a month
#1205 opened Jun 24, 2024 by ivirshup
ExperimentDataPipe should record the iterated joinids P1 Priority 1 - Improvement with wide impact, fix within 1 week pytorch tileDB work
#1182 opened Jun 4, 2024 by ebezzi
Do not hardcode bucket names in the Census codebase 2024-q4 P0 Priority 0 - Critical, fix ASAP! Priority backlog items python api Related to the API
#1181 opened Jun 4, 2024 by ebezzi
@ebezzi
1
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