R-CMD-check #1602
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
# | |
# NOTE: This workflow is overkill for most R packages and | |
# check-standard.yaml is likely a better choice. | |
# usethis::use_github_action("check-standard") will install it. | |
on: | |
push: | |
branches: [main, master] | |
pull_request: | |
branches: [main, master] | |
schedule: | |
- cron: '0 0 * * 2' | |
workflow_dispatch: | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macOS-latest, cache: '~/Library/Application Support/renv', r: 'release'} | |
- {os: windows-latest, r: 'release'} | |
# Use 3.6 to trigger usage of RTools35 | |
# As of 2024-06, downlit now requires R >4.0.0 so this should be deprecated. | |
# - {os: windows-latest, cache: '~\AppData\Local\renv', r: '3.6'} | |
# use 4.1 to check with rtools40's older compiler | |
- {os: windows-latest, r: '4.1'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'devel', http-user-agent: 'release'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'release', cov: 'true'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-1'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-2'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-3'} | |
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-4'} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_KEEP_PKG_SOURCE: yes | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
RENV_PATHS_ROOT: ${{ matrix.config.cache }} | |
steps: | |
- name: Record Linux Version | |
if: runner.os == 'Linux' | |
run: | | |
echo "OS_VERSION=`lsb_release -sr`" >> $GITHUB_ENV | |
mkdir -p "${{ runner.temp }}/sandbox/" | |
echo "RENV_PATHS_SANDBOX=${{ runner.temp }}/sandbox/" >> $GITHUB_ENV | |
- name: "Windows: prevent autocrlf" | |
if: runner.os == 'Windows' | |
run: git config --global core.autocrlf false | |
shell: bash | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- name: "Windows: setup TMPDIR" | |
if: runner.os == 'Windows' | |
run: | | |
git config --global core.autocrlf true # reset setting to prevent errors downstream | |
echo "TMPDIR=${{ runner.temp }}" >> $GITHUB_ENV | |
shell: bash | |
- name: "Setup R" | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- name: "Setup dependencies" | |
uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::rcmdcheck | |
needs: check | |
- name: "Restore {renv} cache" | |
if: runner.os != 'Windows' | |
uses: actions/cache@v4 | |
with: | |
path: ${{ env.RENV_PATHS_ROOT }} | |
key: ${{ runner.os }}-${{ env.OS_VERSION }}-renv-${{ runner.r }}-${{ hashFiles('.github/workflows/R-CMD-check.yaml') }} | |
restore-keys: | | |
${{ runner.os }}-${{ env.OS_VERSION }}-renv-${{ runner.r }}- | |
- name: "Prime {renv} Cache" | |
if: runner.os != 'Windows' | |
run: | | |
renv::settings$snapshot.type("explicit") | |
renv::init() | |
system('sudo rm -rf renv.lock renv .Rprofile') | |
system('git clean -fd -e .github') | |
system('git restore .') | |
shell: Rscript {0} | |
- name: "Session info" | |
run: | | |
options(width = 100) | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
shell: Rscript {0} | |
- name: "Check" | |
uses: r-lib/actions/check-r-package@v2 | |
if: runner.os != 'Windows' | |
with: | |
upload-snapshots: true | |
- name: "Check" | |
uses: r-lib/actions/check-r-package@v2 | |
if: runner.os == 'Windows' | |
env: | |
RENV_PATHS_ROOT: ~ | |
with: | |
upload-snapshots: true | |