update package cache

[zkamvar]

No description provided.

[github-actions]

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

• 🎯 correct output
• 🖼️ correct figures
• ❓ new warnings
• ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/carpentries-incubator/bioc-project/compare/md-outputs..md-outputs-PR-70

The following changes were observed in the rendered markdown documents:

 01-setup.md                        |  4 +-
 02-introduction-to-bioconductor.md | 16 ++++----
 03-installing-bioconductor.md      | 80 ++++++++------------------------------
 04-getting-help.md                 |  6 +--
 05-s4.md                           | 24 +++++++-----
 06-biological-sequences.md         | 14 +++----
 07-genomic-ranges.md               | 12 +++---
 md5sum.txt                         | 34 ++++++++--------
 8 files changed, 75 insertions(+), 115 deletions(-)

What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2023-05-30 16:59:34 +0000

[zkamvar]

The package cache was broken due to not yet figuring out carpentries/sandpaper#453

To get this to work, I ran:

sandpaper::manage_deps() # got an error here
sandpaper::update_cache()

[zkamvar]

This is just a reminder that in order to get the builds for this working again, this PR and #70 need to be merged.

[kevinrue]

thanks, so sorry, I'm tied in teaching and forgot about this, will look at it asap