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29 Open 20 Closed
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Issues list

Conda install command not working and no conda update command
#128 opened Sep 18, 2024 by cherman2
suggestions on handling identifiers content addition Planned new content. plugins Related to the *Plugins* part. reference Related to a *Reference* article.
#127 opened Sep 17, 2024 by gregcaporaso
add tip for using --no-recycle flag when developing pipelines.
#118 opened Aug 15, 2024 by cherman2
add plugin explanation on structure of q2-types and how that avoid circular imports content addition Planned new content. explanation Related to an *Explanation* article. plugins Related to the *Plugins* part.
#117 opened Jul 25, 2024 by gregcaporaso
@ebolyen
when to raise an error versus when to warnings.warn content addition Planned new content. how-to Related to a *How-to guide*. plugins Related to the *Plugins* part.
#108 opened May 30, 2024 by cherman2
1
DRY: figure out how to not duplicate code between the q2-dwq2 plugin and the plugin tutorial content improvement An improvement to existing content. plugins Related to the *Plugins* part.
#103 opened Apr 30, 2024 by gregcaporaso
create plugin actions that wrap functionality written in R content addition Planned new content. how-to Related to a *How-to guide*. plugins Related to the *Plugins* part.
#98 opened Apr 24, 2024 by gregcaporaso
@gregcaporaso
1
add help text and usage examples for all artifact classes and formats in q2-types content improvement An improvement to existing content. general Related to multiple parts. help wanted Assistance is welcomed.
#97 opened Apr 24, 2024 by gregcaporaso
logo background color is slightly off in dark mode - fix to match background content improvement An improvement to existing content. general Related to multiple parts. help wanted Assistance is welcomed.
#95 opened Apr 22, 2024 by gregcaporaso
link to the q2-dwq2 repo at the beginning of the plugin development tutorial, so the reader can/try see the final product content addition Planned new content. plugins Related to the *Plugins* part. tutorial Related to a *Tutorial*.
#93 opened Apr 19, 2024 by gregcaporaso
review all API reference sections to confirm that the APIs that we want in each are referenced content improvement An improvement to existing content. general Related to multiple parts. reference Related to a *Reference* article.
#91 opened Apr 18, 2024 by gregcaporaso
@ebolyen
stop hosting at https://cap-lab.bio/developing-with-qiime2 general Related to multiple parts. help wanted Assistance is welcomed.
#86 opened Apr 16, 2024 by gregcaporaso
2 tasks
configure external links to open in a new tab general Related to multiple parts. help wanted Assistance is welcomed.
#76 opened Apr 13, 2024 by gregcaporaso
address API doc build warnings content improvement An improvement to existing content. general Related to multiple parts. help wanted Assistance is welcomed.
#74 opened Apr 13, 2024 by gregcaporaso
"documentation engine" interface tutorial content proposal Proposed new content. interfaces Related to the *Interfaces* part. tutorial Related to a *Tutorial*.
#71 opened Apr 13, 2024 by gregcaporaso
add multiple sequence alignment Pipeline, with parallel support content addition Planned new content. plugins Related to the *Plugins* part. tutorial Related to a *Tutorial*.
#69 opened Apr 13, 2024 by gregcaporaso
integrate nw-align imports as they are introduced in the code content improvement An improvement to existing content. plugins Related to the *Plugins* part. tutorial Related to a *Tutorial*.
#63 opened Apr 9, 2024 by gregcaporaso
artifact classes content addition Planned new content. explanation Related to an *Explanation* article. plugins Related to the *Plugins* part.
#59 opened Apr 6, 2024 by gregcaporaso
how-to: identify a relevant artifact class content addition Planned new content. how-to Related to a *How-to guide*. plugins Related to the *Plugins* part.
#58 opened Apr 4, 2024 by gregcaporaso
semantic validation content addition Planned new content. explanation Related to an *Explanation* article. framework Related to the *framework* part.
#42 opened Mar 14, 2024 by gregcaporaso
add framework explanation on Pickling content addition Planned new content. explanation Related to an *Explanation* article. framework Related to the *framework* part.
#41 opened Mar 14, 2024 by gregcaporaso
transformation API content addition Planned new content. explanation Related to an *Explanation* article. framework Related to the *framework* part.
#40 opened Mar 14, 2024 by gregcaporaso
update API doc strings in framework for public-facing APIs content improvement An improvement to existing content. general Related to multiple parts. help wanted Assistance is welcomed.
#38 opened Mar 13, 2024 by gregcaporaso
translate plugins *Writing Usage Examples* how-to from rst to md content improvement An improvement to existing content. how-to Related to a *How-to guide*. plugins Related to the *Plugins* part.
#36 opened Mar 11, 2024 by gregcaporaso
translate rst in framework/explanations/types to markdown content improvement An improvement to existing content. explanation Related to an *Explanation* article. framework Related to the *framework* part.
#34 opened Mar 11, 2024 by gregcaporaso
ProTip! Follow long discussions with comments:>50.