initial commit

.gitignore

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+bin/*
+.vscode/*
+predictor

Makefile

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+###########################################################
+
+## USER SPECIFIC DIRECTORIES ##
+
+# CUDA directory:
+CUDA_ROOT_DIR=/usr/local/cuda-11
+
+##########################################################
+
+## CC COMPILER OPTIONS ##
+
+CC=g++
+CC_FLAGS=-std=c++17
+CC_LIBS=
+
+##########################################################
+
+## NVCC COMPILER OPTIONS ##
+
+NVCC=nvcc
+NVCC_FLAGS=--std c++17 -lineinfo
+NVCC_LIBS=
+
+# CUDA library directory:
+CUDA_LIB_DIR= -L$(CUDA_ROOT_DIR)/lib64
+# CUDA include directory:
+CUDA_INC_DIR= -I$(CUDA_ROOT_DIR)/include
+# CUDA linking libraries:
+CUDA_LINK_LIBS= -lcudart
+
+##########################################################
+
+## Project file structure ##
+
+# Source file directory:
+SRC_DIR = src
+
+# Object file directory:
+OBJ_DIR = bin
+
+# Include header file diretory:
+INC_DIR = include
+
+##########################################################
+
+## Make variables ##
+
+# Target executable name:
+EXE = predictor
+
+# Object files:
+OBJS = $(OBJ_DIR)/main.o $(OBJ_DIR)/Chromosome.o $(OBJ_DIR)/TimeSeriesPredictor.o $(OBJ_DIR)/FitnessFunctionKernel.o
+
+##########################################################
+
+## Compile ##
+
+# Link c++ and CUDA compiled object files to target executable:
+$(EXE) : $(OBJS)
+	$(CC) $(CC_FLAGS) $(OBJS) -o $@ $(CUDA_INC_DIR) $(CUDA_LIB_DIR) $(CUDA_LINK_LIBS)
+
+# Compile main .cpp file to object files:
+$(OBJ_DIR)/%.o : %.cpp
+	$(CC) $(CC_FLAGS) -c $< -o $@
+
+# Compile C++ source files to object files:
+$(OBJ_DIR)/%.o : $(SRC_DIR)/%.cpp include/%.h
+	$(CC) $(CC_FLAGS) -c $< -o $@
+
+# Compile CUDA source files to object files:
+$(OBJ_DIR)/%.o : $(SRC_DIR)/%.cu $(INC_DIR)/%.cuh
+	$(NVCC) $(NVCC_FLAGS) -c $< -o $@ $(NVCC_LIBS)
+
+# Clean objects in object directory.
+clean:
+	$(RM) bin/* *.o $(EXE)

README.md

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+# time-series-predictor