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Merscope pre fix #94

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@cornhundred cornhundred commented Jun 10, 2025

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aminbensaad added 30 commits May 25, 2025 18:40
@aminbensaad
infra(ruff): installed & setup Ruff python linter & formatter
6a8a1ca
@aminbensaad
infra(eslint, prettier): installed & setup Eslint + prettier for JS/T…
72f2eb4 
…S linting & formatting
@aminbensaad
infra(jest): installed & setup Jest for JS/TS testing
b0969fe
@aminbensaad
infra(pytest): installed & setup pytest for python testing
584684f
@aminbensaad
infra(pytest, jest): run coverage by default
2b721a8
@aminbensaad
fix(gitignore): extending according to testing, linting, formatting a…
4748375 
…nd repo setup
@aminbensaad
docs(README): updated main README with more professional open-source …
e408cfd 
…project structure, kept previous instructions
@aminbensaad
docs(CONTRIBUTING, README): added sketch for contribution guidlines a…
099471d 
…nd updated README
@aminbensaad
infra(CI/CD): ci: add GitHub Actions workflow
ff9b4e7
@aminbensaad
optim(eslint): extended with rules for circular imports and error-pro…
905b576 
…ne import patterns
@aminbensaad
infra(dependabot): added dependabot setup file for automated dependen…
8c2ea60 
…cy updates weekly, Monday, 9:00am
@aminbensaad
infra(pre-commit): added pre-commit hooks for linting, formatting, an…
2bd81f2 
…d quality checks
@aminbensaad
infra(CI/CD): extended ci workflow with proper docs and automated rel…
88bc992 
…ease publishing to PyPI
@aminbensaad
infra(pyproject): updated with all dev dependencies and extended Ruff…
5598c08 
… linting with performance and Ruff-specific rules
@aminbensaad
infra(scripts): added scripts for automated setup and testing of proj…
f538aa6 
…ect to streamline user experience
@aminbensaad
docs(README, CONTRIBUTING): updated and brutally simplified READMEs t…
d436213 
…o get users setup easily given the new advanced setup
@aminbensaad
test
df26a49
@aminbensaad
infra(CI/CD, pyproject): updated dependencies to prioritize python 3.…
b1ea09f 
…11 but remain compatible with 3.10
@aminbensaad
optim(formatting): ran automatic formatting on all python files
01c045b
@aminbensaad
optim(formatting): updated nbhd
6ab3b98
@aminbensaad
optim(formatting): updated celldega/gc
fc8c4cb
@aminbensaad
optim(formatting): updated init of clust
2c82d9b
@aminbensaad
optim(formatting): updated viz
ce9eebe
@aminbensaad
optim(formatting): updated celldega init
ed8b803
@aminbensaad
optim(formatting): updated & tested full clust module
e2657f1
@aminbensaad
optim(formatting): updated & tested full preprocessing
71ce5af
@aminbensaad
optim(formatting): updated remaining linting issues
679baf9
@aminbensaad
optim(formatting): updated JS using automated fix
6cd6dae
@aminbensaad
optim(formatting): removed .js suffixes from imports
0cec5ea
@aminbensaad
fix(formatting): remove display, failing silently otherwise
0569a61
aminbensaad and others added 30 commits May 29, 2025 20:31
@aminbensaad
fix(pyproject): trying again
a4f3699
@aminbensaad
fix(pyproject): correct hatch usage
9464472
@aminbensaad
infra(package.json): only allowing pnpm as package manager
4e21ecb
@aminbensaad
sanity check
87b6081
@aminbensaad
fix(pyproject): testing with anywidget setup
521cfb4
@aminbensaad
fix(ci): some inspiration form anywidget
2e3434e
@aminbensaad
fix(ci): removing action for now
b13df04
@aminbensaad
fix(ci): small improvements
75afb7e
@aminbensaad
fix(ci): remove pnpm versioning here
65efa5c
@aminbensaad
fix(ci): removing actions for now
97cf651
@aminbensaad
optim(ci): improved dependabot config, made @cornhundred reviewer
ffede1e
@aminbensaad
feat(templates): added issue templates
4995c9c
@aminbensaad
infra(test): testing ci
94625e5
@aminbensaad
optim(ci): refactoring ci to be more self-explanatory
3667b34
@aminbensaad
optim(ci): adjusted format
16f6283
@aminbensaad
optim(ci): reusing more code, merging linting and security in quality…
c350b50 
….yml
@aminbensaad
fix(ci): running js env first to prevent issues with python env
d84bdd8
@aminbensaad
fix(ci): recreated full env setup action
1fee611
@aminbensaad
chore(matrix): removing commented out code
bdcd999
@aminbensaad
fix(clust): extending init to cleanly provide the same interfaces as …
118f34a 
…before
@aminbensaad
fix(pnpm -> npm): 🥲 can't transition yet - too many breaking changes
4a35176
@aminbensaad
fix(README): reworked Readme a bit (test)
163d66f
@aminbensaad
infra(npm): removing pnpm lock file
7e77594
@aminbensaad
fix(README): shortened and added example image for visual appeal
7524060
@aminbensaad
fix(README): cropped demo image more
6177cf7
@aminbensaad
chore(image): remove old image
7089af1
@aminbensaad
fix(assets): moved assets into 'public' directory
332bcd1
@aminbensaad
chore(viz): removing old code
a5edb6b
@aminbensaad
optim(utils): optimize hexToRgb and fix debounce this context
2062c67
@cornhundred
quick changes to get MERSCOPE dataset to process
435a279
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3 participants

@cornhundred @aminbensaad