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@bowang-lab

WangLab @ U of T

BoWang's Lab at University of Toronto

Popular repositories Loading

  1. MedSAM MedSAM Public

    Segment Anything in Medical Images

    Jupyter Notebook 3.8k 519

  2. scGPT scGPT Public

    Jupyter Notebook 1.3k 277

  3. U-Mamba U-Mamba Public

    U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation

    Python 861 85

  4. MedRAX MedRAX Public

    MedRAX: Medical Reasoning Agent for Chest X-ray - ICML 2025

    Python 671 138

  5. MedSAM2 MedSAM2 Public

    MedSAM2: Segment Anything in 3D Medical Images and Videos

    Python 315 70

  6. Graph-Mamba Graph-Mamba Public

    Graph-Mamba: Towards Long-Range Graph Sequence Modelling with Selective State Spaces

    Python 305 37

Repositories

Showing 10 of 56 repositories
  • trl Public Forked from huggingface/trl

    Train transformer language models with reinforcement learning.

    bowang-lab/trl’s past year of commit activity
    Python 0 Apache-2.0 2,207 0 2 Updated Sep 15, 2025
  • AMOS-MM-Solution Public

    Solution to the AMOS-MM challenge

    bowang-lab/AMOS-MM-Solution’s past year of commit activity
    Python 10 MIT 0 0 0 Updated Sep 13, 2025
  • genomic-FM Public
    bowang-lab/genomic-FM’s past year of commit activity
    Python 29 3 1 0 Updated Sep 5, 2025
  • scGPT Public
    bowang-lab/scGPT’s past year of commit activity
    Jupyter Notebook 1,318 MIT 277 154 8 Updated Aug 30, 2025
  • MorphoDiff Public

    MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions based on perturbation encoding.

    bowang-lab/MorphoDiff’s past year of commit activity
    Python 23 Apache-2.0 5 0 0 Updated Aug 13, 2025
  • MedRAX2 Public Forked from bowang-lab/MedRAX

    MedRAX-2

    bowang-lab/MedRAX2’s past year of commit activity
    Python 2 Apache-2.0 142 2 2 Updated Aug 12, 2025
  • Orthrus Public

    Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifically designed for long-sequence data, such as RNA.

    bowang-lab/Orthrus’s past year of commit activity
    Python 77 MIT 16 1 0 Updated Aug 8, 2025
  • MedRAX Public

    MedRAX: Medical Reasoning Agent for Chest X-ray - ICML 2025

    bowang-lab/MedRAX’s past year of commit activity
    Python 671 Apache-2.0 138 4 1 Updated Aug 1, 2025
  • MedSAM2 Public

    MedSAM2: Segment Anything in 3D Medical Images and Videos

    bowang-lab/MedSAM2’s past year of commit activity
    Python 315 Apache-2.0 70 2 1 Updated Jul 12, 2025
  • BioReason Public

    BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model

    bowang-lab/BioReason’s past year of commit activity
    Jupyter Notebook 280 Apache-2.0 41 4 0 Updated Jun 14, 2025
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