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FHIR Terminology Server bootstrapping tools built on HAPI FHIR

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Running the development Docker

download & mount code system sources

mounts/terminologies/data/icd10cm-tabular-2023.xml

declare your code systems

  • id: the code-system identifier
  • type: upload-terminology
  • source: the mounted code-system source file
  • plugin: the plugin module to use for processing the code-system (optional)

mounts/configs/bonfhir-hapi.yml

server:
  url: http://localhost:8080/fhir
  version: r4
tasks:
  - type: upload-definitions
  - type: upload-terminology
    id: http://hl7.org/fhir/sid/icd-10-cm
    source: icd10cm-tabular-2023.xml

when uploading terminologies, make sure to precede them with a 'upload-definitions' task like in the above example, which prepares the server with the required code definitions

build & run the docker image

./build-and-run-docker-image.sh

Running HAPI server from source

Install prerequisites

brew install maven

Clone the Starter project

git clone [email protected]:hapifhir/hapi-fhir-jpaserver-starter.git

Run the HAPI server using Jetty

cd hapi-fhir-jpaserver-starter
mvn -Pjetty jetty:run

Integrating custom terminologies

Add a new upload-terminology task to the bonfhir-hapi.yml configuration file, specifying the id of the terminology, the source file, and the plugin pointing to the module to use for processing the terminology.

- type: upload-terminology
    id: http://www.nlm.nih.gov/research/umls/rxnorm
    source: RxNorm_full_03042024.zip
    plugin: rxnorm

Create a new plugin package for your plugin. You can copy the rxnorm or CPT/HCPCS plugin as base.

- type: upload-terminology
    id: https://www.cms.gov/Medicare/Coding/HCPCSReleaseCodeSets
    source: 2024_DHS_Code_List_Addendum_03_01_2024.zip
    plugin: cpt-hcpcs

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FHIR Terminology Server bootstrapping tools built on HAPI FHIR

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