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Update groot to 0.8.6 #20476

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wants to merge 13 commits into from
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Update groot to 0.8.6 #20476

wants to merge 13 commits into from

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BiocondaBot
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Update groot: 0.8.50.8.6

install with bioconda Conda

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Recipe recipes/groot (click to view/edit other files)
Releases https://github.com/will-rowe/groot/tags
Author @will-rowe

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Feb 22, 2020
@dpryan79
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The lz4 dependency needs to be updated.

@will-rowe
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hi @dpryan79 - thanks for all your effort in trying to get this to work! Are saying this error is due to the incompatible tag on the lz4 library import in the Go mod? This is an indirect dependency which I don't think I have any control over, should I be engaging with the project that uses this dependency?

@dpryan79
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I don't know enough about go to say. The+incompatible tag seems correct since there's no go.mod, I just don't know why go is trying to install the non-existent v3 version.

@will-rowe
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I'm not sure I'm getting the issue here. Go is able to build this despite the +incompatible flags - it's passing the travis tests and the release builds are fine etc. Can you give me any pointers on how to access the Circle error message? All I can see is that the build script failed - sorry for the noob question, I'm struggling to work it out.

@dpryan79
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The log is available here: https://circleci.com/gh/bioconda/bioconda-recipes/95838?utm_campaign=vcs-integration-link&utm_medium=referral&utm_source=github-checks-link

The only obvious error that I see is that it can't install lz4 because it can't find it.

@will-rowe
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will-rowe commented Feb 24, 2020

Thanks very much @dpryan79 . have just had a poke around and I think it's actually being caused by another dependency that is pulling the v3 lz4 lib. Issue here. I'll see if I can fix it

@will-rowe
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closing in favour of a new release - where I have removed these dependencies

@will-rowe will-rowe closed this Apr 23, 2020
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3 participants