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Bunch of OSX fixes for bulk #12933

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merged 1 commit into from
Jan 6, 2019
Merged

Bunch of OSX fixes for bulk #12933

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4 changes: 2 additions & 2 deletions recipes/bioconductor-chromstar/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.8.0" %}
{% set version = "1.8.1" %}
{% set name = "chromstaR" %}
{% set bioc = "3.8" %}

Expand All @@ -10,7 +10,7 @@ source:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 0bcb2867e4f92b89a972829558250f3f
md5: 55388dee59d7db8dd9042778d0ff9f79
build:
number: 0
rpaths:
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6 changes: 3 additions & 3 deletions recipes/bioconductor-chromvar/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.4.0" %}
{% set version = "1.4.1" %}
{% set name = "chromVAR" %}
{% set bioc = "3.8" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 2f2af9a568f88511eb19c286fdf7caaf
md5: 7dcbe9c69e7956109f77d47d3a69edea
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
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4 changes: 2 additions & 2 deletions recipes/bioconductor-methimpute/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.4.0" %}
{% set version = "1.4.1" %}
{% set name = "methimpute" %}
{% set bioc = "3.8" %}

Expand All @@ -10,7 +10,7 @@ source:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
md5: e072c861115fb41c461876d548cd6968
md5: 466e9af2b8ec9e336784625a07056ac4
build:
number: 0
rpaths:
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4 changes: 2 additions & 2 deletions recipes/bioconductor-outrider/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.0.1" %}
{% set version = "1.1.1" %}
{% set name = "OUTRIDER" %}
{% set bioc = "3.8" %}

Expand All @@ -10,7 +10,7 @@ source:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 89fbc10855ad4fb905ad705dc3002f53
md5: 41f7e8b72dda3393c624a06b40656903
build:
number: 0
rpaths:
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6 changes: 3 additions & 3 deletions recipes/r-fateid/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = '0.1.4' %}
{% set version = '0.1.5' %}

{% set posix = 'm2-' if win else '' %}
{% set native = 'm2w64-' if win else '' %}
Expand All @@ -12,12 +12,12 @@ source:
- https://depot.galaxyproject.org/software/r-fateid/r-fateid_{{ version }}_src_all.tar.gz
- {{ cran_mirror }}/src/contrib/FateID_{{ version }}.tar.gz
- {{ cran_mirror }}/src/contrib/Archive/FateID/FateID_{{ version }}.tar.gz
sha256: 1e168ccdef75b6a4229976740e60704d75e2f1d5c3f6757f9fb7798c727f7fec
sha256: 573cb9c3eb580e90038332d16439628b3af409587351dccaa1a22054401c0f7b

build:
merge_build_host: True # [win]

number: 1
number: 0

rpaths:
- lib/R/lib/
Expand Down
3 changes: 1 addition & 2 deletions recipes/r-poppr/meta.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -15,10 +15,9 @@ build:
- lib/

requirements:

build:
- {{ compiler('c') }}

- llvm-openmp # [osx]
host:
- r-base
- r-boot
Expand Down