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a few updates, modify blacklist #12865

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Dec 30, 2018
Merged

a few updates, modify blacklist #12865

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24 changes: 14 additions & 10 deletions build-fail-blacklist
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Original file line number Diff line number Diff line change
Expand Up @@ -812,6 +812,7 @@ recipes/bioconductor-mmnet
recipes/bioconductor-rcytoscape
recipes/bioconductor-browservizdemo
recipes/bioconductor-pannbuilder
recipes/bioconductor-splicer

# Old bioconductor version that's no longer available
recipes/bioconductor-edger/3.12.1
Expand Down Expand Up @@ -916,20 +917,23 @@ recipes/bioconductor-flowvs
recipes/bioconductor-opencyto
recipes/bioconductor-cytoml
recipes/bioconductor-platecore
recipes/bioconductor-ping

# missing r-* deps
recipes/bioconductor-mcagui
recipes/bioconductor-rexposome
recipes/bioconductor-scpipe
recipes/bioconductor-mapkl
# recipes/bioconductor-mcagui
# recipes/bioconductor-rexposome
# recipes/bioconductor-scpipe
# recipes/bioconductor-mapkl
recipes/bioconductor-gqtlstats
recipes/bioconductor-gwascats
recipes/bioconductor-vtpnet

# Waiting on gcc7 builds of deps
recipes/bioconductor-trena
recipes/bioconductor-ritan
recipes/bioconductor-mirsponge
recipes/bioconductor-biocancer
recipes/bioconductor-artms

# recipes/bioconductor-trena
# recipes/bioconductor-ritan
# recipes/bioconductor-mirsponge
# recipes/bioconductor-biocancer
# recipes/bioconductor-artms

# JVM errors
recipes/bioconductor-rgmql
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4 changes: 2 additions & 2 deletions recipes/bioconductor-cicero/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.0.13" %}
{% set version = "1.0.14" %}
{% set name = "cicero" %}
{% set bioc = "3.8" %}

Expand All @@ -10,7 +10,7 @@ source:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
md5: 0adf35ffd0c0887513a9be7f558164ee
md5: b1fc55ada12056f198b3e707f0de715d
build:
number: 0
rpaths:
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