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Modify and unblacklist recipe for Metaseq #11625

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merged 2 commits into from
Oct 27, 2018
Merged

Modify and unblacklist recipe for Metaseq #11625

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262ea99
Fix recipe for metaseq and remove from blacklist
npavlovikj Oct 27, 2018
ee937db
Remove build.sh
npavlovikj Oct 27, 2018
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4 changes: 0 additions & 4 deletions build-fail-blacklist
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Original file line number Diff line number Diff line change
Expand Up @@ -1576,10 +1576,6 @@ recipes/pasta/0.2
# - qiime -> numpy=1.12
recipes/koeken

#conda_build.exceptions.CondaBuildException: Found a build.sh script and a build/script sectioninside meta.yaml. Either remove the build.sh script or remove the build/script section in meta.yaml.
recipes/metaseq


# RuntimeError: Setuptools downloading is disabled in conda build. Be sure to add all dependencies in the meta.yaml url=https://files.pythonhosted.org/packages/source/c/certifi/certifi-2016.9.26.tar.gz#md5=baa81e951a29958563689d868ef1064d
recipes/nucleoatac/0.3.1

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3 changes: 0 additions & 3 deletions recipes/metaseq/build.sh
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25 changes: 15 additions & 10 deletions recipes/metaseq/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,15 +1,19 @@
{% set name = "metaseq" %}
{% set version = "0.5.6" %}
{% set sha256 = "8bb81b6d8e19f6a7227da188731717bde835662f48f6b07581e9605619db5e0d" %}

package:
name: metaseq
version: "0.5.6"
name: {{ name }}
version: {{ version }}

source:
url: https://pypi.python.org/packages/source/m/metaseq/metaseq-0.5.6.tar.gz
md5: f29575db23019a5cd1003bfccb599847
url: https://pypi.python.org/packages/source/m/{{ name }}/{{ name }}-{{ version }}.tar.gz
sha256: {{ sha256 }}

build:
number: 1
skip: True # [not py27]
script: python -m pip install --no-deps --ignore-installed .
number: 2
skip: True # [py3k]
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vvv "

requirements:
host:
Expand All @@ -29,7 +33,6 @@ requirements:
- pyyaml >=3.10
- pybedtools >=0.6.6
- fisher

run:
- python
- scipy >=0.10.1
Expand All @@ -52,5 +55,7 @@ test:

about:
home: https://github.com/daler/metaseq
license: MIT License
summary: 'Integrative analysis of high-thoughput sequencing data'
license: MIT
license_family: MIT
license_file: LICENSE.txt
summary: 'Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data.'