-
Notifications
You must be signed in to change notification settings - Fork 35
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Upgrade 2.5.1 template #220
Conversation
Upstream PR: nf-core/tools#1812
…lure-to-showcase-the-error-message reproduce conda channel setup failure
Co-authored-by: Fabian Egli <[email protected]>
Co-authored-by: Fabian Egli <[email protected]>
Co-authored-by: Fabian Egli <[email protected]>
Important! Template update for nf-core/tools v2.5.1
� Conflicts: � bin/diann_convert.py
|
|
||
if (conda_check_failed) { | ||
if (channels_missing | channel_priority_violation) { |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
BitwiseOperatorInConditional: Use of a bitwise or (|) operator in a conditional
ℹ️ Learn about @sonatype-lift commands
You can reply with the following commands. For example, reply with @sonatype-lift ignoreall to leave out all findings.
Command | Usage |
---|---|
@sonatype-lift ignore |
Leave out the above finding from this PR |
@sonatype-lift ignoreall |
Leave out all the existing findings from this PR |
@sonatype-lift exclude <file|issue|path|tool> |
Exclude specified file|issue|path|tool from Lift findings by updating your config.toml file |
Note: When talking to LiftBot, you need to refresh the page to see its response.
Click here to add LiftBot to another repo.
Was this a good recommendation?
[ 🙁 Not relevant ] - [ 😕 Won't fix ] - [ 😑 Not critical, will fix ] - [ 🙂 Critical, will fix ] - [ 😊 Critical, fixing now ]
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).