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Add linux and macos MKLDNN Building Instruction (#11049)
* add linux and macos doc * update doc * Update MKL_README.md * Update MKL_README.md Add convolution code to verify mkldnn backend * add homebrew link * rename to MKLDNN_README * add mkl verify * trigger * trigger * set mac complier to gcc47 * add VS2017 support experimentally * improve quality * improve quality * modify mac build instruction since prepare_mkldnn.sh has been rm * trigger * add some improvement
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# Build/Install MXNet with MKL-DNN | ||
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Building MXNet with [Intel MKL-DNN](https://github.com/intel/mkl-dnn) will gain better performance when using Intel Xeon CPUs for training and inference. The improvement of performance can be seen in this [page](https://mxnet.incubator.apache.org/faq/perf.html#intel-cpu). Below are instructions for linux, MacOS and Windows platform. | ||
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<h2 id="0">Contents</h2> | ||
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* [1. Linux](#1) | ||
* [2. MacOS](#2) | ||
* [3. Windows](#3) | ||
* [4. Verify MXNet with python](#4) | ||
* [5. Enable MKL BLAS](#5) | ||
* [6. Support](#6) | ||
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<h2 id="1">Linux</h2> | ||
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### Prerequisites | ||
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``` | ||
sudo apt-get update | ||
sudo apt-get install -y build-essential git | ||
sudo apt-get install -y libopenblas-dev liblapack-dev | ||
sudo apt-get install -y libopencv-dev | ||
sudo apt-get install -y graphviz | ||
``` | ||
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### Clone MXNet sources | ||
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``` | ||
git clone --recursive https://github.com/apache/incubator-mxnet.git | ||
cd incubator-mxnet | ||
``` | ||
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### Build MXNet with MKL-DNN | ||
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``` | ||
make -j $(nproc) USE_OPENCV=1 USE_MKLDNN=1 USE_BLAS=mkl USE_INTEL_PATH=/opt/intel | ||
``` | ||
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If you don't have full [MKL](https://software.intel.com/en-us/intel-mkl) library installed, you can use OpenBLAS by setting `USE_BLAS=openblas`. | ||
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<h2 id="2">MacOS</h2> | ||
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### Prerequisites | ||
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Install the dependencies, required for MXNet, with the following commands: | ||
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- [Homebrew](https://brew.sh/) | ||
- gcc (clang in macOS does not support OpenMP) | ||
- OpenCV (for computer vision operations) | ||
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``` | ||
# Paste this command in Mac terminal to install Homebrew | ||
/usr/bin/ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)" | ||
# install dependency | ||
brew update | ||
brew install pkg-config | ||
brew install graphviz | ||
brew tap homebrew/core | ||
brew install opencv | ||
brew tap homebrew/versions | ||
brew install gcc49 | ||
brew link gcc49 #gcc-5 and gcc-7 also work | ||
``` | ||
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### Clone MXNet sources | ||
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``` | ||
git clone --recursive https://github.com/apache/incubator-mxnet.git | ||
cd incubator-mxnet | ||
``` | ||
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### Enable OpenMP for MacOS | ||
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If you want to enable OpenMP for better performance, you should modify the Makefile in MXNet root dictionary: | ||
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Add CFLAGS '-fopenmp' for Darwin. | ||
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``` | ||
ifeq ($(USE_OPENMP), 1) | ||
# ifneq ($(UNAME_S), Darwin) | ||
CFLAGS += -fopenmp | ||
# endif | ||
endif | ||
``` | ||
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### Build MXNet with MKL-DNN | ||
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``` | ||
make -j $(sysctl -n hw.ncpu) CC=gcc-4.9 CXX=g++-4.9 USE_OPENCV=0 USE_OPENMP=1 USE_MKLDNN=1 USE_BLAS=apple USE_PROFILER=1 | ||
``` | ||
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*Note: Temporarily disable OPENCV.* | ||
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<h2 id="3">Windows</h2> | ||
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We recommend to build and install MXNet yourself using [Microsoft Visual Studio 2015](https://www.visualstudio.com/vs/older-downloads/), or you can also try experimentally the latest [Microsoft Visual Studio 2017](https://www.visualstudio.com/downloads/). | ||
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**Visual Studio 2015** | ||
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To build and install MXNet yourself, you need the following dependencies. Install the required dependencies: | ||
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1. If [Microsoft Visual Studio 2015](https://www.visualstudio.com/vs/older-downloads/) is not already installed, download and install it. You can download and install the free community edition. | ||
2. Download and Install [CMake 3](https://cmake.org/) if it is not already installed. | ||
3. Download and install [OpenCV 3](http://sourceforge.net/projects/opencvlibrary/files/opencv-win/3.0.0/opencv-3.0.0.exe/download). | ||
4. Unzip the OpenCV package. | ||
5. Set the environment variable ```OpenCV_DIR``` to point to the ```OpenCV build directory``` (```C:\opencv\build\x64\vc14``` for example). Also, you need to add the OpenCV bin directory (```C:\opencv\build\x64\vc14\bin``` for example) to the ``PATH`` variable. | ||
6. If you have Intel Math Kernel Library (MKL) installed, set ```MKL_ROOT``` to point to ```MKL``` directory that contains the ```include``` and ```lib```. If you want to use MKL blas, you should set ```-DUSE_BLAS=mkl``` when cmake. Typically, you can find the directory in | ||
```C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018\windows\mkl```. | ||
7. If you don't have the Intel Math Kernel Library (MKL) installed, download and install [OpenBLAS](http://sourceforge.net/projects/openblas/files/v0.2.14/). Note that you should also download ```mingw64.dll.zip`` along with openBLAS and add them to PATH. | ||
8. Set the environment variable ```OpenBLAS_HOME``` to point to the ```OpenBLAS``` directory that contains the ```include``` and ```lib``` directories. Typically, you can find the directory in ```C:\Program files (x86)\OpenBLAS\```. | ||
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After you have installed all of the required dependencies, build the MXNet source code: | ||
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1. Download the MXNet source code from [GitHub](https://github.com/apache/incubator-mxnet). Don't forget to pull the submodules: | ||
``` | ||
git clone --recursive https://github.com/apache/incubator-mxnet.git | ||
``` | ||
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2. Copy file `3rdparty/mkldnn/config_template.vcxproj` to incubator-mxnet root. | ||
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3. Start a Visual Studio command prompt. | ||
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4. Use [CMake 3](https://cmake.org/) to create a Visual Studio solution in ```./build``` or some other directory. Make sure to specify the architecture in the | ||
[CMake 3](https://cmake.org/) command: | ||
``` | ||
mkdir build | ||
cd build | ||
cmake -G "Visual Studio 14 Win64" .. -DUSE_CUDA=0 -DUSE_CUDNN=0 -DUSE_NVRTC=0 -DUSE_OPENCV=1 -DUSE_OPENMP=1 -DUSE_PROFILER=1 -DUSE_BLAS=open -DUSE_LAPACK=1 -DUSE_DIST_KVSTORE=0 -DCUDA_ARCH_NAME=All -DUSE_MKLDNN=1 -DCMAKE_BUILD_TYPE=Release | ||
``` | ||
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5. In Visual Studio, open the solution file,```.sln```, and compile it. | ||
These commands produce a library called ```libmxnet.dll``` in the ```./build/Release/``` or ```./build/Debug``` folder. | ||
Also ```libmkldnn.dll``` with be in the ```./build/3rdparty/mkldnn/src/Release/``` | ||
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6. Make sure that all the dll files used above(such as `libmkldnn.dll`, `libmklml.dll`, `libiomp5.dll`, `libopenblas.dll`, etc) are added to the system PATH. For convinence, you can put all of them to ```\windows\system32```. Or you will come across `Not Found Dependencies` when loading mxnet. | ||
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**Visual Studio 2017** | ||
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To build and install MXNet yourself using [Microsoft Visual Studio 2017](https://www.visualstudio.com/downloads/), you need the following dependencies. Install the required dependencies: | ||
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1. If [Microsoft Visual Studio 2017](https://www.visualstudio.com/downloads/) is not already installed, download and install it. You can download and install the free community edition. | ||
2. Download and install [CMake 3](https://cmake.org/files/v3.11/cmake-3.11.0-rc4-win64-x64.msi) if it is not already installed. | ||
3. Download and install [OpenCV](https://sourceforge.net/projects/opencvlibrary/files/opencv-win/3.4.1/opencv-3.4.1-vc14_vc15.exe/download). | ||
4. Unzip the OpenCV package. | ||
5. Set the environment variable ```OpenCV_DIR``` to point to the ```OpenCV build directory``` (e.g., ```OpenCV_DIR = C:\utils\opencv\build```). | ||
6. If you don’t have the Intel Math Kernel Library (MKL) installed, download and install [OpenBlas](https://sourceforge.net/projects/openblas/files/v0.2.20/OpenBLAS%200.2.20%20version.zip/download). | ||
7. Set the environment variable ```OpenBLAS_HOME``` to point to the ```OpenBLAS``` directory that contains the ```include``` and ```lib``` directories (e.g., ```OpenBLAS_HOME = C:\utils\OpenBLAS```). | ||
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After you have installed all of the required dependencies, build the MXNet source code: | ||
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1. Start ```cmd``` in windows. | ||
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2. Download the MXNet source code from GitHub by using following command: | ||
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```r | ||
cd C:\ | ||
git clone --recursive https://github.com/apache/incubator-mxnet.git | ||
``` | ||
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3. Copy file `3rdparty/mkldnn/config_template.vcxproj` to incubator-mxnet root. | ||
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4. Follow [this link](https://docs.microsoft.com/en-us/visualstudio/install/modify-visual-studio) to modify ```Individual components```, and check ```VC++ 2017 version 15.4 v14.11 toolset```, and click ```Modify```. | ||
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5. Change the version of the Visual studio 2017 to v14.11 using the following command (by default the VS2017 is installed in the following path): | ||
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```r | ||
"C:\Program Files (x86)\Microsoft Visual Studio\2017\Community\VC\Auxiliary\Build\vcvars64.bat" -vcvars_ver=14.11 | ||
``` | ||
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6. Create a build dir using the following command and go to the directory, for example: | ||
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```r | ||
mkdir C:\build | ||
cd C:\build | ||
``` | ||
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7. CMake the MXNet source code by using following command: | ||
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```r | ||
cmake -G "Visual Studio 15 2017 Win64" .. -T host=x64 -DUSE_CUDA=0 -DUSE_CUDNN=0 -DUSE_NVRTC=0 -DUSE_OPENCV=1 -DUSE_OPENMP=1 -DUSE_PROFILER=1 -DUSE_BLAS=open -DUSE_LAPACK=1 -DUSE_DIST_KVSTORE=0 -DCUDA_ARCH_NAME=All -DUSE_MKLDNN=1 -DCMAKE_BUILD_TYPE=Release | ||
``` | ||
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8. After the CMake successfully completed, compile the the MXNet source code by using following command: | ||
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```r | ||
msbuild mxnet.sln /p:Configuration=Release;Platform=x64 /maxcpucount | ||
``` | ||
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9. Make sure that all the dll files used above(such as `libmkldnn.dll`, `libmklml.dll`, `libiomp5.dll`, `libopenblas.dll`, etc) are added to the system PATH. For convinence, you can put all of them to ```\windows\system32```. Or you will come across `Not Found Dependencies` when loading mxnet. | ||
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<h2 id="4">Verify MXNet with python</h2> | ||
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``` | ||
cd python | ||
sudo python setup.py install | ||
python -c "import mxnet as mx;print((mx.nd.ones((2, 3))*2).asnumpy());" | ||
Expected Output: | ||
[[ 2. 2. 2.] | ||
[ 2. 2. 2.]] | ||
``` | ||
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### Verify whether MKL-DNN works | ||
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After MXNet is installed, you can verify if MKL-DNN backend works well with a single Convolution layer. | ||
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``` | ||
import mxnet as mx | ||
import numpy as np | ||
num_filter = 32 | ||
kernel = (3, 3) | ||
pad = (1, 1) | ||
shape = (32, 32, 256, 256) | ||
x = mx.sym.Variable('x') | ||
w = mx.sym.Variable('w') | ||
y = mx.sym.Convolution(data=x, weight=w, num_filter=num_filter, kernel=kernel, no_bias=True, pad=pad) | ||
exe = y.simple_bind(mx.cpu(), x=shape) | ||
exe.arg_arrays[0][:] = np.random.normal(size=exe.arg_arrays[0].shape) | ||
exe.arg_arrays[1][:] = np.random.normal(size=exe.arg_arrays[1].shape) | ||
exe.forward(is_train=False) | ||
o = exe.outputs[0] | ||
t = o.asnumpy() | ||
``` | ||
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You can open the `MKLDNN_VERBOSE` flag by setting environment variable: | ||
``` | ||
export MKLDNN_VERBOSE=1 | ||
``` | ||
Then by running above code snippet, you probably will get the following output message which means `convolution` and `reorder` primitive from MKL-DNN are called. Layout information and primitive execution performance are also demonstrated in the log message. | ||
``` | ||
mkldnn_verbose,exec,reorder,jit:uni,undef,in:f32_nchw out:f32_nChw16c,num:1,32x32x256x256,6.47681 | ||
mkldnn_verbose,exec,reorder,jit:uni,undef,in:f32_oihw out:f32_OIhw16i16o,num:1,32x32x3x3,0.0429688 | ||
mkldnn_verbose,exec,convolution,jit:avx512_common,forward_inference,fsrc:nChw16c fwei:OIhw16i16o fbia:undef fdst:nChw16c,alg:convolution_direct,mb32_g1ic32oc32_ih256oh256kh3sh1dh0ph1_iw256ow256kw3sw1dw0pw1,9.98193 | ||
mkldnn_verbose,exec,reorder,jit:uni,undef,in:f32_oihw out:f32_OIhw16i16o,num:1,32x32x3x3,0.0510254 | ||
mkldnn_verbose,exec,reorder,jit:uni,undef,in:f32_nChw16c out:f32_nchw,num:1,32x32x256x256,20.4819 | ||
``` | ||
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<h2 id="5">Enable MKL BLAS</h2> | ||
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To make it convenient for customers, Intel introduced a new license called [Intel® Simplified license](https://software.intel.com/en-us/license/intel-simplified-software-license) that allows to redistribute not only dynamic libraries but also headers, examples and static libraries. | ||
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Installing and enabling the full MKL installation enables MKL support for all operators under the linalg namespace. | ||
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1. Download and install the latest full MKL version following instructions on the [intel website.](https://software.intel.com/en-us/mkl) | ||
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2. Run `make -j ${nproc} USE_BLAS=mkl` | ||
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3. Navigate into the python directory | ||
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4. Run `sudo python setup.py install` | ||
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### Verify whether MKL works | ||
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After MXNet is installed, you can verify if MKL BLAS works well with a single dot layer. | ||
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``` | ||
import mxnet as mx | ||
import numpy as np | ||
shape_x = (1, 10, 8) | ||
shape_w = (1, 12, 8) | ||
x_npy = np.random.normal(0, 1, shape_x) | ||
w_npy = np.random.normal(0, 1, shape_w) | ||
x = mx.sym.Variable('x') | ||
w = mx.sym.Variable('w') | ||
y = mx.sym.batch_dot(x, w, transpose_b=True) | ||
exe = y.simple_bind(mx.cpu(), x=x_npy.shape, w=w_npy.shape) | ||
exe.forward(is_train=False) | ||
o = exe.outputs[0] | ||
t = o.asnumpy() | ||
``` | ||
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You can open the `MKL_VERBOSE` flag by setting environment variable: | ||
``` | ||
export MKL_VERBOSE=1 | ||
``` | ||
Then by running above code snippet, you probably will get the following output message which means `SGEMM` primitive from MKL are called. Layout information and primitive execution performance are also demonstrated in the log message. | ||
``` | ||
Numpy + Intel(R) MKL: THREADING LAYER: (null) | ||
Numpy + Intel(R) MKL: setting Intel(R) MKL to use INTEL OpenMP runtime | ||
Numpy + Intel(R) MKL: preloading libiomp5.so runtime | ||
MKL_VERBOSE Intel(R) MKL 2018.0 Update 1 Product build 20171007 for Intel(R) 64 architecture Intel(R) Advanced Vector Extensions 512 (Intel(R) AVX-512) enabled processors, Lnx 2.40GHz lp64 intel_thread NMICDev:0 | ||
MKL_VERBOSE SGEMM(T,N,12,10,8,0x7f7f927b1378,0x1bc2140,8,0x1ba8040,8,0x7f7f927b1380,0x7f7f7400a280,12) 8.93ms CNR:OFF Dyn:1 FastMM:1 TID:0 NThr:40 WDiv:HOST:+0.000 | ||
``` | ||
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<h2 id="6">Next Steps and Support</h2> | ||
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- For questions or support specific to MKL, visit the [Intel MKL](https://software.intel.com/en-us/mkl) | ||
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- For questions or support specific to MKL, visit the [Intel MKLDNN](https://github.com/intel/mkl-dnn) | ||
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- If you find bugs, please open an issue on GitHub for [MXNet with MKL](https://github.com/apache/incubator-mxnet/labels/MKL) or [MXNet with MKLDNN](https://github.com/apache/incubator-mxnet/labels/MKLDNN) |
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