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122 changes: 32 additions & 90 deletions core/src/main/java/org/apache/iceberg/MicroBatches.java
Original file line number Diff line number Diff line change
Expand Up @@ -22,12 +22,11 @@
import java.util.Collections;
import java.util.List;
import java.util.Map;
import java.util.stream.Collectors;
import org.apache.iceberg.io.CloseableIterable;
import org.apache.iceberg.io.CloseableIterator;
import org.apache.iceberg.io.FileIO;
import org.apache.iceberg.relocated.com.google.common.base.Preconditions;
import org.apache.iceberg.relocated.com.google.common.collect.ImmutableList;
import org.apache.iceberg.relocated.com.google.common.collect.Iterables;
import org.apache.iceberg.relocated.com.google.common.collect.Lists;
import org.apache.iceberg.util.Pair;
import org.slf4j.Logger;
Expand Down Expand Up @@ -113,73 +112,28 @@ public MicroBatchBuilder specsById(Map<Integer, PartitionSpec> specs) {
}

public MicroBatch generate(long startFileIndex, long targetSizeInBytes, boolean scanAllFiles) {
return generate(
startFileIndex,
Iterables.size(snapshot.addedDataFiles(io)),
targetSizeInBytes,
scanAllFiles);
}

public MicroBatch generate(
long startFileIndex, long endFileIndex, long targetSizeInBytes, boolean scanAllFiles) {
Preconditions.checkArgument(endFileIndex >= 0, "endFileIndex is unexpectedly smaller than 0");
Preconditions.checkArgument(
startFileIndex >= 0, "startFileIndex is unexpectedly smaller than 0");
Preconditions.checkArgument(
targetSizeInBytes > 0, "targetSizeInBytes should be larger than 0");

List<ManifestFile> manifests =
scanAllFiles
? snapshot.dataManifests(io)
: snapshot.dataManifests(io).stream()
.filter(m -> m.snapshotId().equals(snapshot.snapshotId()))
.collect(Collectors.toList());

List<Pair<ManifestFile, Integer>> manifestIndexes = indexManifests(manifests);
List<Pair<ManifestFile, Integer>> skippedManifestIndexes =
skipManifests(manifestIndexes, startFileIndex);

return generateMicroBatch(
skippedManifestIndexes, startFileIndex, targetSizeInBytes, scanAllFiles);
}

/**
* Method to index the data files for each manifest. For example, if manifest m1 has 3 data
* files, manifest m2 has 2 data files, manifest m3 has 1 data file, then the index will be (m1,
* 0), (m2, 3), (m3, 5).
*
* @param manifestFiles List of input manifests used to index.
* @return a list of manifest index with key as manifest file, value as file counts.
*/
private static List<Pair<ManifestFile, Integer>> indexManifests(
List<ManifestFile> manifestFiles) {
int currentFileIndex = 0;
List<Pair<ManifestFile, Integer>> manifestIndexes = Lists.newArrayList();

for (ManifestFile manifest : manifestFiles) {
manifestIndexes.add(Pair.of(manifest, currentFileIndex));
currentFileIndex += manifest.addedFilesCount() + manifest.existingFilesCount();
}

return manifestIndexes;
}

/**
* Method to skip the manifest file in which the index is smaller than startFileIndex. For
* example, if the index list is : (m1, 0), (m2, 3), (m3, 5), and startFileIndex is 4, then the
* returned manifest index list is: (m2, 3), (m3, 5).
*
* @param indexedManifests List of input manifests.
* @param startFileIndex Index used to skip the processed manifests.
* @return a sub-list of manifest file index which only contains the manifest indexes larger
* than the startFileIndex.
*/
private static List<Pair<ManifestFile, Integer>> skipManifests(
List<Pair<ManifestFile, Integer>> indexedManifests, long startFileIndex) {
if (startFileIndex == 0) {
return indexedManifests;
}

int manifestIndex = 0;
for (Pair<ManifestFile, Integer> manifest : indexedManifests) {
if (manifest.second() > startFileIndex) {
break;
}

manifestIndex++;
}

return indexedManifests.subList(manifestIndex - 1, indexedManifests.size());
MicroBatchesUtil.skippedManifestIndexesFromSnapshot(
io, snapshot, startFileIndex, scanAllFiles),
startFileIndex,
endFileIndex,
targetSizeInBytes,
scanAllFiles);
}

/**
Expand All @@ -188,25 +142,23 @@ private static List<Pair<ManifestFile, Integer>> skipManifests(
*
* @param indexedManifests A list of indexed manifests to generate MicroBatch
* @param startFileIndex A startFileIndex used to skip processed files.
* @param endFileIndex An endFileIndex used to find files to include, it not inclusive.
Comment thread
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Outdated
* @param targetSizeInBytes Used to control the size of MicroBatch, the processed file bytes
* must be smaller than this size.
* @param scanAllFiles Used to check whether all the data files should be processed, or only
* added files.
* @return A MicroBatch.
*/
@SuppressWarnings("checkstyle:CyclomaticComplexity")
private MicroBatch generateMicroBatch(
List<Pair<ManifestFile, Integer>> indexedManifests,
long startFileIndex,
long endFileIndex,
long targetSizeInBytes,
boolean scanAllFiles) {
if (indexedManifests.isEmpty()) {
return new MicroBatch(
snapshot.snapshotId(),
startFileIndex,
startFileIndex + 1,
0L,
Collections.emptyList(),
true);
snapshot.snapshotId(), startFileIndex, endFileIndex, 0L, Collections.emptyList(), true);
}

long currentSizeInBytes = 0L;
Expand All @@ -218,11 +170,18 @@ private MicroBatch generateMicroBatch(
currentFileIndex = indexedManifests.get(idx).second();

try (CloseableIterable<FileScanTask> taskIterable =
open(indexedManifests.get(idx).first(), scanAllFiles);
MicroBatchesUtil.openManifestFile(
io,
specsById,
caseSensitive,
snapshot,
indexedManifests.get(idx).first(),
scanAllFiles);
CloseableIterator<FileScanTask> taskIter = taskIterable.iterator()) {
while (taskIter.hasNext()) {
FileScanTask task = taskIter.next();
if (currentFileIndex >= startFileIndex) {
// want to read [startFileIndex ... endFileIndex)
if (currentFileIndex >= startFileIndex && currentFileIndex < endFileIndex) {
// Make sure there's at least one task in each MicroBatch to void job to be stuck,
// always add task
// firstly.
Expand All @@ -231,7 +190,7 @@ private MicroBatch generateMicroBatch(
}

currentFileIndex++;
if (currentSizeInBytes >= targetSizeInBytes) {
if (currentSizeInBytes >= targetSizeInBytes || currentFileIndex >= endFileIndex) {
break;
}
}
Expand Down Expand Up @@ -259,6 +218,7 @@ private MicroBatch generateMicroBatch(
}
}

// [startFileIndex ....currentFileIndex)
return new MicroBatch(
snapshot.snapshotId(),
startFileIndex,
Expand All @@ -267,23 +227,5 @@ private MicroBatch generateMicroBatch(
tasks,
isLastIndex);
}

private CloseableIterable<FileScanTask> open(ManifestFile manifestFile, boolean scanAllFiles) {
ManifestGroup manifestGroup =
new ManifestGroup(io, ImmutableList.of(manifestFile))
.specsById(specsById)
.caseSensitive(caseSensitive);
if (!scanAllFiles) {
manifestGroup =
manifestGroup
.filterManifestEntries(
entry ->
entry.snapshotId() == snapshot.snapshotId()
&& entry.status() == ManifestEntry.Status.ADDED)
.ignoreDeleted();
}

return manifestGroup.planFiles();
}
}
}
123 changes: 123 additions & 0 deletions core/src/main/java/org/apache/iceberg/MicroBatchesUtil.java
Original file line number Diff line number Diff line change
@@ -0,0 +1,123 @@
/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
*/
package org.apache.iceberg;

import java.util.List;
import java.util.Map;
import java.util.stream.Collectors;
import org.apache.iceberg.io.CloseableIterable;
import org.apache.iceberg.io.FileIO;
import org.apache.iceberg.relocated.com.google.common.collect.ImmutableList;
import org.apache.iceberg.relocated.com.google.common.collect.Lists;
import org.apache.iceberg.util.Pair;

public class MicroBatchesUtil {
Comment thread
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private MicroBatchesUtil() {}

public static List<Pair<ManifestFile, Integer>> skippedManifestIndexesFromSnapshot(
FileIO io, Snapshot snapshot, long startFileIndex, boolean scanAllFiles) {
// Preconditions.checkArgument(startFileIndex >= 0, "startFileIndex is unexpectedly smaller
// than 0");
List<ManifestFile> manifests =
scanAllFiles
? snapshot.dataManifests(io)
: snapshot.dataManifests(io).stream()
.filter(m -> m.snapshotId().equals(snapshot.snapshotId()))
.collect(Collectors.toList());

List<Pair<ManifestFile, Integer>> manifestIndexes = MicroBatchesUtil.indexManifests(manifests);

return MicroBatchesUtil.skipManifests(manifestIndexes, startFileIndex);
}

public static CloseableIterable<FileScanTask> openManifestFile(
FileIO io,
Map<Integer, PartitionSpec> specsById,
boolean caseSensitive,
Snapshot snapshot,
ManifestFile manifestFile,
boolean scanAllFiles) {

ManifestGroup manifestGroup =
new ManifestGroup(io, ImmutableList.of(manifestFile))
.specsById(specsById)
.caseSensitive(caseSensitive);
if (!scanAllFiles) {
manifestGroup =
manifestGroup
.filterManifestEntries(
entry ->
entry.snapshotId() == snapshot.snapshotId()
&& entry.status() == ManifestEntry.Status.ADDED)
.ignoreDeleted();
}

return manifestGroup.planFiles();
}

/**
* Method to index the data files for each manifest. For example, if manifest m1 has 3 data files,
* manifest m2 has 2 data files, manifest m3 has 1 data file, then the index will be (m1, 0), (m2,
* 3), (m3, 5).
*
* @param manifestFiles List of input manifests used to index.
* @return a list of manifest index with key as manifest file, value as file counts.
*/
private static List<Pair<ManifestFile, Integer>> indexManifests(
List<ManifestFile> manifestFiles) {
int currentFileIndex = 0;
List<Pair<ManifestFile, Integer>> manifestIndexes = Lists.newArrayList();

for (ManifestFile manifest : manifestFiles) {
manifestIndexes.add(Pair.of(manifest, currentFileIndex));
currentFileIndex += manifest.addedFilesCount() + manifest.existingFilesCount();
}

return manifestIndexes;
}

/**
* Method to skip the manifest file in which the index is smaller than startFileIndex. For
* example, if the index list is : (m1, 0), (m2, 3), (m3, 5), and startFileIndex is 4, then the
* returned manifest index list is: (m2, 3), (m3, 5).
*
* @param indexedManifests List of input manifests.
* @param startFileIndex Index used to skip the processed manifests.
* @return a sub-list of manifest file index which only contains the manifest indexes larger than
* the startFileIndex.
*/
private static List<Pair<ManifestFile, Integer>> skipManifests(
List<Pair<ManifestFile, Integer>> indexedManifests, long startFileIndex) {
if (startFileIndex == 0) {
return indexedManifests;
}

int manifestIndex = 0;
for (Pair<ManifestFile, Integer> manifest : indexedManifests) {
if (manifest.second() > startFileIndex) {
break;
}

manifestIndex++;
}

return indexedManifests.subList(Math.max(manifestIndex - 1, 0), indexedManifests.size());
}
}
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