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Core: Remove all delete files in RewriteFiles action. #2303
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -20,12 +20,13 @@ | |
| package org.apache.iceberg.actions; | ||
|
|
||
| import java.io.IOException; | ||
| import java.util.Arrays; | ||
| import java.util.Collection; | ||
| import java.util.List; | ||
| import java.util.Map; | ||
| import java.util.stream.Collectors; | ||
| import org.apache.iceberg.CombinedScanTask; | ||
| import org.apache.iceberg.DataFile; | ||
| import org.apache.iceberg.ContentFile; | ||
| import org.apache.iceberg.FileScanTask; | ||
| import org.apache.iceberg.PartitionSpec; | ||
| import org.apache.iceberg.RewriteFiles; | ||
|
|
@@ -37,6 +38,7 @@ | |
| import org.apache.iceberg.io.CloseableIterable; | ||
| import org.apache.iceberg.io.CloseableIterator; | ||
| import org.apache.iceberg.io.FileIO; | ||
| import org.apache.iceberg.io.RewriteResult; | ||
| import org.apache.iceberg.relocated.com.google.common.base.Preconditions; | ||
| import org.apache.iceberg.relocated.com.google.common.collect.Iterables; | ||
| import org.apache.iceberg.relocated.com.google.common.collect.ListMultimap; | ||
|
|
@@ -196,7 +198,7 @@ public BaseRewriteDataFilesAction<ThisT> filter(Expression expr) { | |
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| @Override | ||
| public RewriteDataFilesActionResult execute() { | ||
| CloseableIterable<FileScanTask> fileScanTasks = null; | ||
| CloseableIterable<FileScanTask> fileScanTasks = CloseableIterable.empty(); | ||
| try { | ||
| fileScanTasks = table.newScan() | ||
| .caseSensitive(caseSensitive) | ||
|
|
@@ -215,13 +217,14 @@ public RewriteDataFilesActionResult execute() { | |
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| Map<StructLikeWrapper, Collection<FileScanTask>> groupedTasks = groupTasksByPartition(fileScanTasks.iterator()); | ||
| Map<StructLikeWrapper, Collection<FileScanTask>> filteredGroupedTasks = groupedTasks.entrySet().stream() | ||
| .filter(kv -> kv.getValue().size() > 1) | ||
| .filter(partitionTasks -> doPartitionNeedRewrite(partitionTasks.getValue())) | ||
| .collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)); | ||
|
|
||
| // Nothing to rewrite if there's only one DataFile in each partition. | ||
| // Nothing to rewrite if there's only one file in each partition. | ||
| if (filteredGroupedTasks.isEmpty()) { | ||
| return RewriteDataFilesActionResult.empty(); | ||
| } | ||
|
|
||
| // Split and combine tasks under each partition | ||
| List<CombinedScanTask> combinedScanTasks = filteredGroupedTasks.values().stream() | ||
| .map(scanTasks -> { | ||
|
|
@@ -230,22 +233,26 @@ public RewriteDataFilesActionResult execute() { | |
| return TableScanUtil.planTasks(splitTasks, targetSizeInBytes, splitLookback, splitOpenFileCost); | ||
| }) | ||
| .flatMap(Streams::stream) | ||
| .filter(task -> task.files().size() > 1 || isPartialFileScan(task)) | ||
| .filter(this::doTaskNeedRewrite) | ||
| .collect(Collectors.toList()); | ||
|
|
||
| if (combinedScanTasks.isEmpty()) { | ||
| return RewriteDataFilesActionResult.empty(); | ||
| } | ||
|
|
||
| List<DataFile> addedDataFiles = rewriteDataForTasks(combinedScanTasks); | ||
| List<DataFile> currentDataFiles = combinedScanTasks.stream() | ||
| .flatMap(tasks -> tasks.files().stream().map(FileScanTask::file)) | ||
| .collect(Collectors.toList()); | ||
| replaceDataFiles(currentDataFiles, addedDataFiles); | ||
| // Execute the real rewrite tasks in parallelism. | ||
| RewriteResult rewriteResult = rewriteDataForTasks(combinedScanTasks); | ||
|
|
||
| return new RewriteDataFilesActionResult(currentDataFiles, addedDataFiles); | ||
| } | ||
| // Commit the RewriteFiles transaction to iceberg table. | ||
| replaceDataFiles(rewriteResult); | ||
|
|
||
| return new RewriteDataFilesActionResult( | ||
| Lists.newArrayList(rewriteResult.dataFilesToDelete()), | ||
| Lists.newArrayList(rewriteResult.deleteFilesToDelete()), | ||
| Lists.newArrayList(rewriteResult.dataFilesToAdd()), | ||
| Lists.newArrayList(rewriteResult.deleteFilesToAdd()) | ||
| ); | ||
| } | ||
|
|
||
| private Map<StructLikeWrapper, Collection<FileScanTask>> groupTasksByPartition( | ||
| CloseableIterator<FileScanTask> tasksIter) { | ||
|
|
@@ -262,31 +269,64 @@ private Map<StructLikeWrapper, Collection<FileScanTask>> groupTasksByPartition( | |
| return tasksGroupedByPartition.asMap(); | ||
| } | ||
|
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||
| private void replaceDataFiles(Iterable<DataFile> deletedDataFiles, Iterable<DataFile> addedDataFiles) { | ||
| private void replaceDataFiles(RewriteResult result) { | ||
| try { | ||
| RewriteFiles rewriteFiles = table.newRewrite(); | ||
| rewriteFiles.rewriteFiles(Sets.newHashSet(deletedDataFiles), Sets.newHashSet(addedDataFiles)); | ||
|
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||
| rewriteFiles.rewriteFiles( | ||
| Sets.newHashSet(result.dataFilesToDelete()), | ||
| Sets.newHashSet(result.deleteFilesToDelete()), | ||
| Sets.newHashSet(result.dataFilesToAdd()), | ||
| Sets.newHashSet(result.deleteFilesToAdd()) | ||
| ); | ||
|
|
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| commit(rewriteFiles); | ||
| } catch (Exception e) { | ||
| Tasks.foreach(Iterables.transform(addedDataFiles, f -> f.path().toString())) | ||
| // Remove all the newly produced files if possible. | ||
| Iterable<ContentFile<?>> addedFiles = Iterables.concat( | ||
| Arrays.asList(result.dataFilesToAdd()), | ||
| Arrays.asList(result.deleteFilesToAdd()) | ||
| ); | ||
|
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||
| Tasks.foreach(Iterables.transform(addedFiles, f -> f.path().toString())) | ||
| .noRetry() | ||
| .suppressFailureWhenFinished() | ||
| .onFailure((location, exc) -> LOG.warn("Failed to delete: {}", location, exc)) | ||
| .run(fileIO::deleteFile); | ||
|
|
||
| throw e; | ||
| } | ||
| } | ||
|
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| private boolean isPartialFileScan(CombinedScanTask task) { | ||
| private boolean doPartitionNeedRewrite(Collection<FileScanTask> partitionTasks) { | ||
| int files = 0; | ||
| for (FileScanTask scanTask : partitionTasks) { | ||
|
Member
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. I believe this would break splitting large files, since a file scan task with only a single file will never be marked for rewrite. |
||
| files += 1; // One for data file. | ||
| files += scanTask.deletes().size(); | ||
| } | ||
| return files > 1; | ||
| } | ||
|
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||
| private boolean doTaskNeedRewrite(CombinedScanTask task) { | ||
| Preconditions.checkArgument(task != null && task.files().size() > 0, | ||
| "Files in CombinedScanTask could not be null or empty"); | ||
| if (task.files().size() == 1) { | ||
| FileScanTask fileScanTask = task.files().iterator().next(); | ||
| return fileScanTask.file().fileSizeInBytes() != fileScanTask.length(); | ||
| FileScanTask scanTask = task.files().iterator().next(); | ||
| if (scanTask.deletes().size() > 0) { | ||
| // There are 1 data file and several delete files, we need to rewrite them into one data file. | ||
| return true; | ||
| } else { | ||
| // There is only 1 data file. If the rewrite data bytes happens to be a complete data file, then we don't | ||
| // need to do the real rewrite action. | ||
| return scanTask.file().fileSizeInBytes() != scanTask.length(); | ||
| } | ||
| } else { | ||
| return false; | ||
| // There are multiple FileScanTask. | ||
| return true; | ||
| } | ||
| } | ||
|
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| protected abstract FileIO fileIO(); | ||
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||
| protected abstract List<DataFile> rewriteDataForTasks(List<CombinedScanTask> combinedScanTask); | ||
| protected abstract RewriteResult rewriteDataForTasks(List<CombinedScanTask> combinedScanTask); | ||
| } | ||
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139 changes: 139 additions & 0 deletions
139
core/src/main/java/org/apache/iceberg/io/RewriteResult.java
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,139 @@ | ||
| /* | ||
| * Licensed to the Apache Software Foundation (ASF) under one | ||
| * or more contributor license agreements. See the NOTICE file | ||
| * distributed with this work for additional information | ||
| * regarding copyright ownership. The ASF licenses this file | ||
| * to you under the Apache License, Version 2.0 (the | ||
| * "License"); you may not use this file except in compliance | ||
| * with the License. You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, | ||
| * software distributed under the License is distributed on an | ||
| * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY | ||
| * KIND, either express or implied. See the License for the | ||
| * specific language governing permissions and limitations | ||
| * under the License. | ||
| */ | ||
|
|
||
| package org.apache.iceberg.io; | ||
|
|
||
| import java.io.Serializable; | ||
| import java.util.Collections; | ||
| import java.util.Set; | ||
| import org.apache.iceberg.DataFile; | ||
| import org.apache.iceberg.DeleteFile; | ||
| import org.apache.iceberg.relocated.com.google.common.collect.Iterables; | ||
| import org.apache.iceberg.relocated.com.google.common.collect.Sets; | ||
|
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| public class RewriteResult implements Serializable { | ||
| // Files to delete. | ||
| private final DataFile[] dataFilesToDelete; | ||
| private final DeleteFile[] deleteFilesToDelete; | ||
|
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| // Files to add. | ||
| private final DataFile[] dataFilesToAdd; | ||
| private final DeleteFile[] deleteFilesToAdd; | ||
|
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| private RewriteResult(Set<DataFile> dataFilesToDelete, | ||
| Set<DeleteFile> deleteFilesToDelete, | ||
| Set<DataFile> dataFilesToAdd, | ||
| Set<DeleteFile> deleteFilesToAdd) { | ||
| this.dataFilesToDelete = dataFilesToDelete.toArray(new DataFile[0]); | ||
| this.deleteFilesToDelete = deleteFilesToDelete.toArray(new DeleteFile[0]); | ||
| this.dataFilesToAdd = dataFilesToAdd.toArray(new DataFile[0]); | ||
| this.deleteFilesToAdd = deleteFilesToAdd.toArray(new DeleteFile[0]); | ||
| } | ||
|
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| public DataFile[] dataFilesToDelete() { | ||
| return dataFilesToDelete; | ||
| } | ||
|
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| public DeleteFile[] deleteFilesToDelete() { | ||
| return deleteFilesToDelete; | ||
| } | ||
|
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| public DataFile[] dataFilesToAdd() { | ||
| return dataFilesToAdd; | ||
| } | ||
|
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| public DeleteFile[] deleteFilesToAdd() { | ||
| return deleteFilesToAdd; | ||
| } | ||
|
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| public static Builder builder() { | ||
| return new Builder(); | ||
| } | ||
|
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| public static class Builder { | ||
| private final Set<DataFile> dataFilesToDelete = Sets.newHashSet(); | ||
| private final Set<DeleteFile> deleteFilesToDelete = Sets.newHashSet(); | ||
| private final Set<DataFile> dataFilesToAdd = Sets.newHashSet(); | ||
| private final Set<DeleteFile> deleteFilesToAdd = Sets.newHashSet(); | ||
|
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| public Builder addDataFilesToDelete(DataFile... dataFiles) { | ||
| Collections.addAll(dataFilesToDelete, dataFiles); | ||
| return this; | ||
| } | ||
|
|
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| public Builder addDataFilesToDelete(Iterable<DataFile> dataFiles) { | ||
| Iterables.addAll(dataFilesToDelete, dataFiles); | ||
| return this; | ||
| } | ||
|
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| public Builder addDeleteFilesToDelete(DeleteFile... deleteFiles) { | ||
| Collections.addAll(deleteFilesToDelete, deleteFiles); | ||
| return this; | ||
| } | ||
|
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| public Builder addDeleteFilesToDelete(Iterable<DeleteFile> deleteFiles) { | ||
| Iterables.addAll(deleteFilesToDelete, deleteFiles); | ||
| return this; | ||
| } | ||
|
|
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| public Builder addDataFilesToAdd(DataFile... dataFiles) { | ||
| Collections.addAll(dataFilesToAdd, dataFiles); | ||
| return this; | ||
| } | ||
|
|
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| public Builder addDataFilesToAdd(Iterable<DataFile> dataFiles) { | ||
| Iterables.addAll(dataFilesToAdd, dataFiles); | ||
| return this; | ||
| } | ||
|
|
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| public Builder addDeleteFilesToAdd(Iterable<DeleteFile> deleteFiles) { | ||
| Iterables.addAll(deleteFilesToAdd, deleteFiles); | ||
| return this; | ||
| } | ||
|
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| public Builder addDeleteFilesToAdd(DeleteFile... deleteFiles) { | ||
| Collections.addAll(deleteFilesToAdd, deleteFiles); | ||
| return this; | ||
| } | ||
|
|
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| public Builder merge(Iterable<RewriteResult> results) { | ||
| for (RewriteResult result : results) { | ||
| Collections.addAll(dataFilesToDelete, result.dataFilesToDelete); | ||
| Collections.addAll(deleteFilesToDelete, result.deleteFilesToDelete); | ||
| Collections.addAll(dataFilesToAdd, result.dataFilesToAdd); | ||
| Collections.addAll(deleteFilesToAdd, result.deleteFilesToAdd); | ||
| } | ||
| return this; | ||
| } | ||
|
|
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| public Builder merge(RewriteResult... results) { | ||
| for (RewriteResult result : results) { | ||
| Collections.addAll(dataFilesToDelete, result.dataFilesToDelete); | ||
| Collections.addAll(deleteFilesToDelete, result.deleteFilesToDelete); | ||
| Collections.addAll(dataFilesToAdd, result.dataFilesToAdd); | ||
| Collections.addAll(deleteFilesToAdd, result.deleteFilesToAdd); | ||
| } | ||
| return this; | ||
| } | ||
|
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| public RewriteResult build() { | ||
| return new RewriteResult(dataFilesToDelete, deleteFilesToDelete, dataFilesToAdd, deleteFilesToAdd); | ||
| } | ||
| } | ||
| } |
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I'm not sure whether this name
RewriteDataFilesActionResultshould be renamed toRewriteFilesActionResultbecause the rewrite action is removing all the deletions from files set, it also rewrite the delete files actually.