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HBASE-26707: Reduce number of renames during bulkload #4066
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,166 @@ | ||
| /** | ||
| * | ||
| * Licensed to the Apache Software Foundation (ASF) under one | ||
| * or more contributor license agreements. See the NOTICE file | ||
| * distributed with this work for additional information | ||
| * regarding copyright ownership. The ASF licenses this file | ||
| * to you under the Apache License, Version 2.0 (the | ||
| * "License"); you may not use this file except in compliance | ||
| * with the License. You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, software | ||
| * distributed under the License is distributed on an "AS IS" BASIS, | ||
| * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | ||
| * See the License for the specific language governing permissions and | ||
| * limitations under the License. | ||
| */ | ||
| package org.apache.hadoop.hbase.mapreduce; | ||
|
|
||
| import org.apache.commons.lang3.RandomStringUtils; | ||
| import org.apache.hadoop.conf.Configuration; | ||
| import org.apache.hadoop.fs.Path; | ||
| import org.apache.hadoop.hbase.Cell; | ||
| import org.apache.hadoop.hbase.CellUtil; | ||
| import org.apache.hadoop.hbase.HBaseConfiguration; | ||
| import org.apache.hadoop.hbase.HBaseTestingUtil; | ||
| import org.apache.hadoop.hbase.IntegrationTestBase; | ||
| import org.apache.hadoop.hbase.IntegrationTestingUtility; | ||
| import org.apache.hadoop.hbase.KeyValue; | ||
| import org.apache.hadoop.hbase.TableName; | ||
| import org.apache.hadoop.hbase.client.Admin; | ||
| import org.apache.hadoop.hbase.client.Connection; | ||
| import org.apache.hadoop.hbase.client.ConnectionFactory; | ||
| import org.apache.hadoop.hbase.client.Consistency; | ||
| import org.apache.hadoop.hbase.client.RegionLocator; | ||
| import org.apache.hadoop.hbase.client.Result; | ||
| import org.apache.hadoop.hbase.client.Scan; | ||
| import org.apache.hadoop.hbase.client.TableDescriptor; | ||
| import org.apache.hadoop.hbase.client.TableDescriptorBuilder; | ||
| import org.apache.hadoop.hbase.coprocessor.ObserverContext; | ||
| import org.apache.hadoop.hbase.coprocessor.RegionCoprocessor; | ||
| import org.apache.hadoop.hbase.coprocessor.RegionCoprocessorEnvironment; | ||
| import org.apache.hadoop.hbase.coprocessor.RegionObserver; | ||
| import org.apache.hadoop.hbase.io.ImmutableBytesWritable; | ||
| import org.apache.hadoop.hbase.regionserver.InternalScanner; | ||
| import org.apache.hadoop.hbase.regionserver.storefiletracker.StoreFileTrackerFactory; | ||
| import org.apache.hadoop.hbase.testclassification.IntegrationTests; | ||
| import org.apache.hadoop.hbase.tool.BulkLoadHFiles; | ||
| import org.apache.hadoop.hbase.util.Bytes; | ||
| import org.apache.hadoop.hbase.util.EnvironmentEdgeManager; | ||
| import org.apache.hadoop.hbase.util.RegionSplitter; | ||
| import org.apache.hadoop.io.LongWritable; | ||
| import org.apache.hadoop.io.NullWritable; | ||
| import org.apache.hadoop.io.Writable; | ||
| import org.apache.hadoop.io.WritableComparable; | ||
| import org.apache.hadoop.io.WritableComparator; | ||
| import org.apache.hadoop.io.WritableUtils; | ||
| import org.apache.hadoop.mapreduce.InputFormat; | ||
| import org.apache.hadoop.mapreduce.InputSplit; | ||
| import org.apache.hadoop.mapreduce.Job; | ||
| import org.apache.hadoop.mapreduce.JobContext; | ||
| import org.apache.hadoop.mapreduce.Mapper; | ||
| import org.apache.hadoop.mapreduce.Partitioner; | ||
| import org.apache.hadoop.mapreduce.RecordReader; | ||
| import org.apache.hadoop.mapreduce.Reducer; | ||
| import org.apache.hadoop.mapreduce.TaskAttemptContext; | ||
| import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat; | ||
| import org.apache.hadoop.util.StringUtils; | ||
| import org.apache.hadoop.util.ToolRunner; | ||
| import org.apache.hbase.thirdparty.com.google.common.base.Joiner; | ||
| import org.apache.hbase.thirdparty.com.google.common.collect.Sets; | ||
| import org.apache.hbase.thirdparty.org.apache.commons.cli.CommandLine; | ||
| import org.junit.Test; | ||
| import org.junit.experimental.categories.Category; | ||
| import org.slf4j.Logger; | ||
| import org.slf4j.LoggerFactory; | ||
| import java.io.DataInput; | ||
| import java.io.DataOutput; | ||
| import java.io.IOException; | ||
| import java.util.ArrayList; | ||
| import java.util.List; | ||
| import java.util.Map; | ||
| import java.util.Optional; | ||
| import java.util.Random; | ||
| import java.util.Set; | ||
| import java.util.concurrent.atomic.AtomicLong; | ||
| import static org.junit.Assert.assertEquals; | ||
|
|
||
| /** | ||
| * Test Bulk Load and MR on a distributed cluster. | ||
| * With FileBased StorefileTracker enabled. | ||
| * It starts an MR job that creates linked chains | ||
| * | ||
| * The format of rows is like this: | ||
| * Row Key -> Long | ||
| * | ||
| * L:<< Chain Id >> -> Row Key of the next link in the chain | ||
| * S:<< Chain Id >> -> The step in the chain that his link is. | ||
| * D:<< Chain Id >> -> Random Data. | ||
| * | ||
| * All chains start on row 0. | ||
| * All rk's are > 0. | ||
| * | ||
| * After creating the linked lists they are walked over using a TableMapper based Mapreduce Job. | ||
| * | ||
| * There are a few options exposed: | ||
| * | ||
| * hbase.IntegrationTestBulkLoad.chainLength | ||
| * The number of rows that will be part of each and every chain. | ||
| * | ||
| * hbase.IntegrationTestBulkLoad.numMaps | ||
| * The number of mappers that will be run. Each mapper creates on linked list chain. | ||
| * | ||
| * hbase.IntegrationTestBulkLoad.numImportRounds | ||
| * How many jobs will be run to create linked lists. | ||
| * | ||
| * hbase.IntegrationTestBulkLoad.tableName | ||
| * The name of the table. | ||
| * | ||
| * hbase.IntegrationTestBulkLoad.replicaCount | ||
| * How many region replicas to configure for the table under test. | ||
| */ | ||
| @Category(IntegrationTests.class) | ||
| public class IntegrationTestFileBasedSFTBulkLoad extends IntegrationTestBulkLoad { | ||
|
|
||
| private static final Logger LOG = LoggerFactory.getLogger(IntegrationTestFileBasedSFTBulkLoad.class); | ||
|
|
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| private static String NUM_MAPS_KEY = "hbase.IntegrationTestBulkLoad.numMaps"; | ||
| private static String NUM_IMPORT_ROUNDS_KEY = "hbase.IntegrationTestBulkLoad.numImportRounds"; | ||
| private static String NUM_REPLICA_COUNT_KEY = "hbase.IntegrationTestBulkLoad.replicaCount"; | ||
| private static int NUM_REPLICA_COUNT_DEFAULT = 1; | ||
|
|
||
| @Test | ||
| public void testFileBasedSFTBulkLoad() throws Exception { | ||
| super.testBulkLoad(); | ||
| } | ||
|
|
||
| @Override | ||
| public void setUpCluster() throws Exception { | ||
| util = getTestingUtil(getConf()); | ||
| util.getConfiguration().set(StoreFileTrackerFactory.TRACKER_IMPL, | ||
| "org.apache.hadoop.hbase.regionserver.storefiletracker.FileBasedStoreFileTracker"); | ||
| util.initializeCluster(1); | ||
| int replicaCount = getConf().getInt(NUM_REPLICA_COUNT_KEY, NUM_REPLICA_COUNT_DEFAULT); | ||
| if (LOG.isDebugEnabled() && replicaCount != NUM_REPLICA_COUNT_DEFAULT) { | ||
| LOG.debug("Region Replicas enabled: " + replicaCount); | ||
| } | ||
|
|
||
| // Scale this up on a real cluster | ||
| if (util.isDistributedCluster()) { | ||
| util.getConfiguration().setIfUnset(NUM_MAPS_KEY, | ||
| Integer.toString(util.getAdmin().getRegionServers().size() * 10)); | ||
| util.getConfiguration().setIfUnset(NUM_IMPORT_ROUNDS_KEY, "5"); | ||
| } else { | ||
| util.startMiniMapReduceCluster(); | ||
| } | ||
| } | ||
|
|
||
| public static void main(String[] args) throws Exception { | ||
| Configuration conf = HBaseConfiguration.create(); | ||
| IntegrationTestingUtility.setUseDistributedCluster(conf); | ||
| int status = ToolRunner.run(conf, new IntegrationTestFileBasedSFTBulkLoad(), args); | ||
| System.exit(status); | ||
| } | ||
| } |
| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -27,6 +27,7 @@ | |
| import java.util.Map; | ||
| import java.util.concurrent.ConcurrentHashMap; | ||
| import java.util.function.Consumer; | ||
| import org.apache.commons.lang3.StringUtils; | ||
| import org.apache.commons.lang3.mutable.MutableInt; | ||
| import org.apache.hadoop.conf.Configuration; | ||
| import org.apache.hadoop.fs.FileStatus; | ||
|
|
@@ -341,27 +342,36 @@ private User getActiveUser() throws IOException { | |
| return user; | ||
| } | ||
|
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| private static class SecureBulkLoadListener implements BulkLoadListener { | ||
| protected static class SecureBulkLoadListener implements BulkLoadListener { | ||
| // Target filesystem | ||
| private final FileSystem fs; | ||
| private final String stagingDir; | ||
| private final Configuration conf; | ||
| // Source filesystem | ||
| private FileSystem srcFs = null; | ||
| private Map<String, FsPermission> origPermissions = null; | ||
| private Map<String, String> origlSources = null; | ||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Could be <String,Path> and save need for path conversion again in
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. nit:
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. I left it like that because
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more.
Ok, let's just then follow var naming pattern, then. |
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| public SecureBulkLoadListener(FileSystem fs, String stagingDir, Configuration conf) { | ||
| this.fs = fs; | ||
| this.stagingDir = stagingDir; | ||
| this.conf = conf; | ||
| this.origPermissions = new HashMap<>(); | ||
| this.origlSources = new HashMap<>(); | ||
| } | ||
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| @Override | ||
| public String prepareBulkLoad(final byte[] family, final String srcPath, boolean copyFile) | ||
| throws IOException { | ||
| public String prepareBulkLoad(final byte[] family, final String srcPath, boolean copyFile, | ||
| String customStaging ) throws IOException { | ||
| Path p = new Path(srcPath); | ||
| Path stageP = new Path(stagingDir, new Path(Bytes.toString(family), p.getName())); | ||
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| //store customStaging for failedBulkLoad | ||
| String currentStaging = stagingDir; | ||
| if(StringUtils.isNotEmpty(customStaging)){ | ||
| currentStaging = customStaging; | ||
| } | ||
|
wchevreuil marked this conversation as resolved.
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| Path stageP = new Path(currentStaging, new Path(Bytes.toString(family), p.getName())); | ||
|
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| // In case of Replication for bulk load files, hfiles are already copied in staging directory | ||
| if (p.equals(stageP)) { | ||
|
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@@ -390,11 +400,16 @@ public String prepareBulkLoad(final byte[] family, final String srcPath, boolean | |
| LOG.debug("Moving " + p + " to " + stageP); | ||
| FileStatus origFileStatus = fs.getFileStatus(p); | ||
| origPermissions.put(srcPath, origFileStatus.getPermission()); | ||
| origlSources.put(stageP.toString(), srcPath); | ||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. One idea for FILE SFT, could we always force the
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. We could. My only concern is that it might be impractical over a certain data size especially if there is no config or param that would allow the user to use rename if they need to.
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. True. My main concern is how safe this rename would be, if we don't have hboss in the picture. Could concurrent bulkloads be a problem in such cases? Maybe a workaround for such deployments would be to always pass a custom staging dir?
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. I do not think concurrency is an issue. I'm not sure I understand your comment about "always pass a custom staging dir". The staging dir by default is different for each bulkLoad process. I break this by introducing the "custom staging dir" which always points to the live data folder as a workaround to skip moving hfiles to an actual staging dir without loosing the existing error handling. We can't change it and decrease the number of moves at the same time.
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Ah, yeah, then we would need to rename from the custom stage to the actual dir anyways. I think we can leave it this way. For S3 with SFT, I think the best practice would be to pass the copy option, for consistency. Shouldn't have much difference, as s3 renames are basically copies. |
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| if(!fs.rename(p, stageP)) { | ||
| throw new IOException("Failed to move HFile: " + p + " to " + stageP); | ||
| } | ||
| } | ||
| fs.setPermission(stageP, PERM_ALL_ACCESS); | ||
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| if(StringUtils.isNotEmpty(customStaging)) { | ||
| fs.setPermission(stageP, PERM_ALL_ACCESS); | ||
| } | ||
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| return stageP.toString(); | ||
| } | ||
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@@ -412,35 +427,37 @@ private void closeSrcFs() throws IOException { | |
| } | ||
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| @Override | ||
| public void failedBulkLoad(final byte[] family, final String srcPath) throws IOException { | ||
| public void failedBulkLoad(final byte[] family, final String stagedPath) throws IOException { | ||
| try { | ||
| Path p = new Path(srcPath); | ||
| if (srcFs == null) { | ||
| srcFs = FileSystem.newInstance(p.toUri(), conf); | ||
| } | ||
| if (!FSUtils.isSameHdfs(conf, srcFs, fs)) { | ||
| // files are copied so no need to move them back | ||
| String src = origlSources.get(stagedPath); | ||
| if(StringUtils.isEmpty(src)){ | ||
| LOG.debug(stagedPath + " was not moved to staging. No need to move back"); | ||
| return; | ||
| } | ||
| Path stageP = new Path(stagingDir, new Path(Bytes.toString(family), p.getName())); | ||
|
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| // In case of Replication for bulk load files, hfiles are not renamed by end point during | ||
| // prepare stage, so no need of rename here again | ||
| if (p.equals(stageP)) { | ||
|
wchevreuil marked this conversation as resolved.
|
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| LOG.debug(p.getName() + " is already available in source directory. Skipping rename."); | ||
| Path stageP = new Path(stagedPath); | ||
| if (!fs.exists(stageP)) { | ||
| throw new IOException( | ||
| "Missing HFile: " + stageP + ", can't be moved back to it's original place"); | ||
| } | ||
|
|
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| //we should not move back files if the original exists | ||
| Path srcPath = new Path(src); | ||
| if(srcFs.exists(srcPath)) { | ||
| LOG.debug(src + " is already at it's original place. No need to move."); | ||
| return; | ||
| } | ||
|
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| LOG.debug("Moving " + stageP + " back to " + p); | ||
| if (!fs.rename(stageP, p)) { | ||
| throw new IOException("Failed to move HFile: " + stageP + " to " + p); | ||
| LOG.debug("Moving " + stageP + " back to " + srcPath); | ||
| if (!fs.rename(stageP, srcPath)) { | ||
| throw new IOException("Failed to move HFile: " + stageP + " to " + srcPath); | ||
| } | ||
|
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| // restore original permission | ||
| if (origPermissions.containsKey(srcPath)) { | ||
| fs.setPermission(p, origPermissions.get(srcPath)); | ||
| if (origPermissions.containsKey(stagedPath)) { | ||
| fs.setPermission(srcPath, origPermissions.get(src)); | ||
| } else { | ||
| LOG.warn("Can't find previous permission for path=" + srcPath); | ||
| LOG.warn("Can't find previous permission for path=" + stagedPath); | ||
| } | ||
| } finally { | ||
| closeSrcFs(); | ||
|
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