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  • Perelman School of Medicine, University of Pennsylvania
  • Philadelphia, PA

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  1. SCGid SCGid Public

    SCGid, a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries

    Python 3 3

  2. toggleterm-repl.nvim toggleterm-repl.nvim Public

    Plugin that adds some functionality to make toggleterm a bit more ergonomic as a repl spawner.

    Lua 2

  3. r-tublerone r-tublerone Public

    Some useful R classes and functions that were useful to my research.

    R 1

  4. orthologs_aa_to_nucl orthologs_aa_to_nucl Public

    Parse a table of protein ortholog names and get their corresponding nucleotide sequences.

    Rust 1 1

  5. detect-hgt-by-ais detect-hgt-by-ais Public

    Pipeline for detecting horizontal gene transfer using alien index scores in line with Alexander et al. 2016 PNAS.

    Python 1

  6. biorust biorust Public

    Rust

551 contributions in the last year

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Activity overview

Contributed to penn-microbioinfo/pmbi, amsesk/neovim-config, amsesk/tublerone.heatmap and 14 other repositories
Loading A graph representing amsesk's contributions from April 21, 2024 to April 27, 2025. The contributions are 100% commits, 0% pull requests, 0% issues, 0% code review.

Contribution activity

April 2025

19 contributions in private repositories Apr 2 – Apr 25
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