Skip to content

Commit

Permalink
Changed version to 0.3.0 after fixing the recursion depth bug and rem…
Browse files Browse the repository at this point in the history
…oving use_racon
  • Loading branch information
aljpetri committed Sep 21, 2023
1 parent 6d7681c commit 1f511d3
Show file tree
Hide file tree
Showing 3 changed files with 3 additions and 3 deletions.
2 changes: 1 addition & 1 deletion isONform_parallel.py
Original file line number Diff line number Diff line change
Expand Up @@ -306,7 +306,7 @@ def main(args):
if __name__ == '__main__':
parser = argparse.ArgumentParser(description="De novo reconstruction of long-read transcriptome reads",
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument('--version', action='version', version='%(prog)s 0.2.1')
parser.add_argument('--version', action='version', version='%(prog)s 0.3.0')
parser.add_argument('--fastq_folder', type=str, default=False,
help='Path to input fastq folder with reads in clusters')
parser.add_argument('--t', dest="nr_cores", type=int, default=8, help='Number of cores allocated for clustering')
Expand Down
2 changes: 1 addition & 1 deletion main.py
Original file line number Diff line number Diff line change
Expand Up @@ -586,7 +586,7 @@ def main(args):
if __name__ == '__main__':
parser = argparse.ArgumentParser(description="De novo error correction of long-read transcriptome reads",
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument('--version', action='version', version='%(prog)s 0.2.1')
parser.add_argument('--version', action='version', version='%(prog)s 0.3.0')
parser.add_argument('--fastq', type=str, default=False, help='Path to input fastq file with reads')

parser.add_argument('--k', type=int, default=20, help='Kmer size')
Expand Down
2 changes: 1 addition & 1 deletion setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@
setup(

name='isONform', # Required
version='0.2.1', # Required
version='0.3.0', # Required
description='De novo construction of isoforms from long-read data ', # Required
long_description=long_description, # Optional
long_description_content_type='text/markdown',
Expand Down

0 comments on commit 1f511d3

Please sign in to comment.