Skip to content

Commit

Permalink
Added main README, /data, and /source
Browse files Browse the repository at this point in the history
  • Loading branch information
aleimba committed Jun 29, 2016
1 parent cedb687 commit aa400ab
Show file tree
Hide file tree
Showing 15 changed files with 10,677 additions and 2 deletions.
181 changes: 179 additions & 2 deletions README.md

Large diffs are not rendered by default.

236 changes: 236 additions & 0 deletions data/Adhesion_invasion_virulence_factors.faa
Original file line number Diff line number Diff line change
@@ -0,0 +1,236 @@
>EC042_pAA055 aap NA dispersin [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MKKIKFVIFSGILGISLNAFAGGSGWNADNVDPSQCIKQSGVQYTYNSGVSVCMQGLNEG
KVRGVSVSGVFYYNDGTTSNFKGVVTPSTPVNTNQDINKTNKVGVQKYRALTEWVK

>EC042_pAA008 aatA NA outer_membrane_protein [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MRHILYSFLAINAYLFSTQTLAKDCIIDNFFQKSIQFNSYSLDIEELDINKHNNIKTMLP
DINIGLGQYINNNQWFSSITDSNFYLSLSYNLLSAYEAKMQNDKLDIANYLKYIEMLSER
NNYIINLFSEIINYKIKKSHLMLMLERYRKLNKEYEIAKRKMSIGLISVLDVEMRYNILQ
KIRFDIDVLEEEESLLSDKISREYHVPESAIPDITYHKLKECKTADFYTLLAENKKLKIK
AADIDNDIRKLSEIPSFYLSFGLTPKQGGALGNMSLRKMDYSASLGISFPLMGLFSSSEN
QKEKIISISRTRNELLKENIKLDLLEKEIRQKIDKLEKNLAMMKNELALKKRKIEYINYR
VKNGQDDVITYLSSVENLHETENEFQKIGYEIEYYSLYHYFLLQHISNTGEM

>EC042_pAA009 aatB NA aatb [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MIEGNVVTVERKLFSVLNHEYTAKKDIVAMKRNMEEKKLSRLKGAKIHLTSMFSKGLISR
ESLHDIDEKISNTELTIMGLDIESKNLEQLLKLSSPFLHTPFIIRNIFVTNEQYVNAGDD
IMSVELLDNFYIDVKFDPVSITGNIRDKRIRYRSLVNSLMGSATVVKNIRASGESTQGED
TSGLRSITLLIDGDRNELSNLLDTAFEIIIDD

>EC042_pAA010 aatC NA ABC_transporter_ATP-binding-protein [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MIRVKIHKKPIENRTILNNSTIEIKEGSFNIITGPSGVGKTSLLNIIGLLDNAFVGEYEL
FGKKVEIKDNSITTYIRRKYFGFIFQDSLINVKQNVLRNILCSVDSQNIIAARERINEVL
VSVGLSNINNNVSFLSGGEKQRLALARALIKKPSILLADEPTASLDIKNKKLVMNILSEY
NNQGGTVVMVTHDLELIDENMTLIQLLNT

>EC042_pAA011 aatD NA hypothetical_protein [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MKFAIVLLYFFAYYLAARKRRVSLFFTILLYSIIFSGMYFSSGFLEYYGSSNLYLSFGLL
CYNMITLVIYGFLSSYGLLGACLHALSLTSLSAFGMFIPLNPLIVLYYDFPSILPRTDIP
VLNLLILNLIPAVTFSLKISFFLRSLILLLLFPLIWKTPVNITHPPLNIVIVQVGLYFKK
VGVRGNFYTDLNEFVRNKKVDLIILSENVFFGYKNDYIKERTKHLLKQLKDNRLHYKYGI
LMNLYGYQDINNVVSAFWHKEEFLLHQKSKLIPFFEKKSFYNSPEPSTSPFLYYKKKYNE
QDILDFNNIKMSIHICYEGLFPEGESRRKDISIVQSDYSWLSDNHKYDNTLINGSILSKF
SVSPNTPLINIQNYGGTVFIDNNWKIDMDLFNRSKTEPFLFTQI

>EC042_pAA007 aatP NA permease [Escherichia coli O44:H18 042 plasmid pAA (EAEC)] (Adhesion_invasion)
MTTLHYYLNEALLNIIENRRQNFAFLVFLSLSFIGIIITDSLIYSVSLKAEEELKVHSDK
VIFVKLYRPKTVGYITEKFITVSKVLSFSKSAFLYVSDTPFSGELFSVNGIDKLGLNTEY
SGDLNDKYNGNVAIVNESSPFFSKKQIFINGVPFKIIGVRLNSKTDFLDSLGLKASQSDE
HIFIPLETMFKVKLDNRVNAVKIFLDNIVTKRDINNVKRVLYDNDIRKFDIVTSLNAKEA
VDRVLERFSLLTNSVYVILTLSASVTCFILSKRSFYSRRVELSLKIIHGTEKKEITVLII
IESLIMLSVCLFISVIYAGVIMHIIKYFLDVTISIRTTMITISLANVLLVFISANIIFGR
LFFSINPVNAIKGKIE

>ECOBMAE bmaE AAA23523 M-agglutinin_subunit_(bmaE) [Escherichia coli IH11165] (Adhesion_invasion)
MNLKKIAIASSVFAGITMALTCHAVTVTATHTVESDAEFTIDWVDAGPTTTDAKDGEVWG
HLDMTQTRGTPTFGKLRNPQGETSPGPLKAPFSFTGPDGHTARAYLDSYGAPIHNYAGDN
LANGVKVGSGSGNTPFVVGTASRLTARIFGDQTLVPGVYRTTFELTTWTD

>Z1670 csgG NA curli_production_assembly/transport_component [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET
GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV
AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN
VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI
FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES

>Z1671 csgF NA curli_assembly_protein_CsgF [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MRVXHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF
GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT
GQTSTIQVSGLQNNSTDF

>Z1672 csgE NA curli_assembly_protein_CsgE [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT
INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS
TGDLAHDEF

>Z1673 csgD NA DNA-binding_transcriptional_regulator_CsgD [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM
MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG
LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL
FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR

>Z1675 csgB NA curlin_minor_subunit [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQL
RQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGS
GNKANITQYGTQKTAIVVQRQSQMAIRVTQR

>Z1676 csgA NA cryptic_curlin_major_subunit [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MKLLKVAAIAAIVFSGSALAGVVPQYGGGGGNHGGGGNNSGPNSELNIYQYGGGNSALAL
QADARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKDSHMTVKQFG
GGNGAAVDQTASNSTVNVTQVGFGNNATAHQY

>Z1677 csgC NA putative_autoagglutination_protein [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK
TLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPPSSEKS

>ECU07174 hra1 AAC13753 heat_resistant_agglutinin_1 [Escherichia coli O9:H10:K99 (UPEC)] (Adhesion_invasion)
MNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLADQRFLSGNGEETSKYKG
GDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKN
EVSVNTLMLNAYYDFRNDSAFTPWVSAGIGYAKEIHQKTTGISTWDYGYGSSGRESLSRS
GSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIM
LGVTYNF

>ECOK1_0581 ibeB NA cation_efflux_system_protein_CusC [Escherichia coli O18:K1:H7 IHE3034 (MNEC)] (Adhesion_invasion)
MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVD
NQVKTLISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSAT
TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY
AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN
ALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAA
RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ
QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL
EVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGGWQQ

>ECOK1_4427 ibeC NA sulfatase_family_protein [Escherichia coli O18:K1:H7 IHE3034 (MNEC)] (Adhesion_invasion)
MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPV
FLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYF
SLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIKNKPFE
KTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLV
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFAN
EKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQS
AREYDTNVLKPFQEVLKDPAPKKLIIVHLLGTHIKYKYRYPEDQGKFDGNTEHVPPGLNA
EELESYNDYDNANLYNDHVVASLIKDFKATDPNGFLVYFSDHGEEVYDTPPHKTQGRNED
NPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRS
VVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ

>ECOK1_4837 ibeA NA invasion_protein_IbeA [Escherichia coli O18:K1:H7 IHE3034 (MNEC)] (Adhesion_invasion)
MEFYLEPARNIPVLATTEVLVVGGGPSGIAAAMSAAREGAATMLIERFGCFGGMMTTAGV
ESIAWWRHENTVESGGLAREIEETAKSMGASSPEPQSNSQAINAERFKLVADAMLEQAGV
RRVLHITAVDVIKQGNNLLGVITESKSGRQAILANVIIDCTGDADIAWFAGAPFIKRERE
ELMCMTTVFSCANINKNAFMQNINSTEPKYGDWGADEENKNWSYDVHESCRDMFSPYLGK
VFAKGKSAGIIPKDVTLGGSWSTVTEYGDANYLNVVSIPAVDCTDVFDLTRAEIEGRKQA
MQAIEALRQFQPGFEQAQLKNFGMTVGTRESRHIIGRVQLTENDICNEGRHADSIGVFPE
FIDGNGHLKLPLEANYFQIPYGVMIPQQVENLLVCGRAIDADNFAYATIRNMGCCIVTGE
GAGTAAAIAIKNNTTVSQVDIQTVQERLQQNGVKVF

>c3610 iha NA bifunctional_enterobactin_receptor/adhesin_protein [Escherichia coli O6:K2:H1 CFT073 (UPEC)] (Adhesion_invasion)
MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYH
DLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDGVRQGGSSDVTPNGFSAMN
TGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESNKW
GNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRIPYPTESQNYNLGAR
LDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGYDRTLRYERNKISAGYDHTFTFGTW
KSYLNWNETENKGRELVRSVLKRDKWGLAGQPRELKESNLILNSLLLTPLGESHLVTVGG
EFQSSSMKDGVVLASTGETFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPR
AYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTNLLGNPNLKPEESVSYEA
GVYYDNPAGLNANVTGFMTDFSNKIVSYSINDNTNSYVNSGKARLHGVEFAGTLPLWSED
VTLSLNYTWTRSEQRDGDNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGKTPRFT
QNYSSLSAVQKKVYDEKGEYLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYS
AGKSTLYAGDYFQTGSSTTGYVIPERNYWMSLNYQF

>ECS88_3547 nlpI NA lipoprotein_NlpI [Escherichia coli O45:K1:H7 S88 (MNEC)] (Adhesion_invasion)
MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDE
RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFD
SVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEK
QAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYL
GKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ

>Z1307 ompA NA outer_membrane_protein_A [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA
FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGG
MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN
GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ
LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM
GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA

>Z2053 paa NA putative_intestinal_colonization_factor_encoded_by_prophage_CP-933O [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MRNIMAGFLIFLSSAAYADINLYGPGGPHTALLDAAKLYAEKTGIIVNVHYGPQNKWNED
AKKNADILFGASEQSALAIIRDHKDSFSEKDIQPLYLRKSILLVKKGNPKNIRSIDDLTR
PGIGVIVNDGGGTSNTSGTGVWEDIAGRKGNIETVAAIRKNIILYAPNSGTARKALENQP
GADVWITWADWAASNPEIGDVVEIAPDYVIWRDMNITVRQDANDETRRFAEWLQTDEAAP
AFKKYGWTRKGT

>c2398 tcpC NP_754290 Tir_domain_containing_protein [Escherichia coli O6:K2:H1 CFT073 (UPEC)] (Adhesion_invasion)
MIAYENIEFFICLVNVLGNNMYNILFFIFLSIAIPFLLFLAWKQHLKTKEIRSYLLKEGY
NIIFNGEGNSYLAFNISNATFRAGNLTSNDYFQASISYIHDYRWEWKEVEAKKINNIFII
YISNIDFPSQKLFYRNNKSLAEIDWAKLQAIFHQPYEIQNDVMQDNNNTHYDFFISHAKE
DKDTFVRPLVDELNRLGVIIWYDEQTLEVGDSLRRNIDLGLRKANYGIVILSHNFLNKKW
TQYELDSLINRAVYDDNKIILPIWHNINAQEVSKYSHYLADKMALQTSLYSVKEIARELA
EIAYRRR

>ETEC_3907 tia NA heat_resistant_agglutinin_1 [Escherichia coli O78:K80:H11 H10407 (ETEC)] (Adhesion_invasion)
MKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDFGDDVYKYKG
GDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDGGREDTQ
NRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISDISALHY
SGYDNNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKSEADVKSHDI
MLGVTYHF

>L7095 toxB NA putative_cytotoxin [Escherichia coli O157:H7 EDL933 (EHEC)] (Adhesion_invasion)
MIHPGSSLDKAINNTRVKNVSTDVKHGQIQERKRNFIYKKNDDISSRFKLYSSLVKQKNA
TEDVVLIGKMILDEVRSYRTIHNDRNIVSNSGNWKTSFLCNLARLLYSIFNGSNYFCSRE
GENNSSPSSTLLTIHQPEKQELLQQKSIKHLPTSNNIDGYIKIRKTRGAEDQTTTITQSL
IINELLNGVDRNTIPFQKISELNDIIHSYENMQIKNSRKGIEILVKQGELLSSLINDNKG
NKQLSDNASKIINLLGIEYQSHKVDIEPFIHAVWVAGAPPDNTFSYITAFLNTYKDYTYL
LWIDPNAFGAAKFSGILKNIAMNYAIMRLRRTNPHLAEEMNEVILKIQNIQNETIEFKET
RERLKELENRYKSLTSETKEKFNVFFLESMIGMQDNYFTYCISNGISNTDDISRLDFLTN
VLKLSPEVQNDFKSTVEKNKRDIDLLKNTISQKFGDRFQLRDINTLESFKKPQDYFFYQQ
EMLLRWNYAAASDQVRINILKEYGGIYTDTDILPAYSDKVSQIINEKSDDKRFFEDLKLR
RIISESILSLIKGEKYSIKHDGLDETTLNQLNNILSEIEKLTIDDYFKPVETKVVRDTFK
IFKRYQKWTENTWNIRGNNNFMLTHKGSKCIDFILSGQKKQYLELQRIRDNISYNNLFYT
TEDLKSLNNVAIGGIPAKKYLEHGLFSEYRQDGTIPYVVSTLNISGPDMIMRQMKKYYKS
LGRIGEVHIKDNKLSDVNFLGVYASSNKDNKSFNWLNPVSVGINDITPDDESSWAVRNND
INKILFEKINCHVPEKLPTSLYYEIDSRSFFQGWDNKSIKHVTEINKDLIKDINLLLTSS
NIDVKLLIKLDRELYAISSKIDNPLALRSIRTLQLQLANYVTSNTFEPENTINFIYDFYR
KKQDDLLSAIKLFSRNDADTKIIVWYNSVMEKNVFLREVISCVLRSKKVDSYINENKKNL
SKEDAGALRDYAKLKMKELFSMLDDDGYKKIITTNAYIKERDKLSGIIYNIENSIISGHE
SFDIIRSNQHEWGDLSTVEQFKKFEFYVKSELSSAKSIFDDIKNKYITDPETKRNVLYHQ
LDSDIKERIAFLDISHYAYPGSLLEKLQLSGYVFSDINIIAEYLLASYGVSGHYSHGVVY
PAPSDKLLELLRRHTKSNSEWIEKITPYVYDILSDNVSNVLRPPLSEEQKKILNDIKLEI
SKSVSEQYFMKLTEQKSSVIGIKYSVDFDRYNENLFLSLPINQNLTLPFMYRYFEMLYDI
HIGIIENKANREFIYSKFSSLNLDFLINDERVLNLEGLIKKYKYLSLSEIHRTLTNSTSF
ADISIPLLQTICPSITTIIKKTEYYGHQLTNAMTVASVVKPYDFSNLGAINSIDKSVSDV
PALHTIVEQAKYNLLSWNDFYNTHASIWDTIARQHKSTNIEFHPQSLLFDRDSKGKCLGL
SLLYLDTGGYGGGYQKLRHNIDTASTLYQTKYNDNLKLSNRDDFFLRKTQRIITMSNELG
NNRLKNAQLEVLELKDPILTEGILYQRRISSLLITTEYHSLALQQISSFWRVTDPNFGHC
DFHSLAQALTFIKNITSNRNFSSLYGSGIVKIYFSESLNNWKYIKLPLVQTGSLLRDIYL
TTPEKLSTSGGSLNIMGHLVPVSFIYDIGGVINGNRISESTDVKNKIRSLKINGDILQHY
INTHYLSEEQTQKIKDIVDFLGIQDNTIKVKLESDIKPISEIQQPLHSILSRQKEHVKNL
LSGLLDEFSNKLRKQGLSLKTNVLSVNNFKESKINSDTVEVTVTDLQGRLYRVDIDTRVI
GLTFKEGINSLSEALEHMNIDAIMSVIGLVQYARMIKMNDNISAIDHAGAVSDIKNIVDK
FLGGILTLTNNRVYNPGGVSGASLEGFISSGLEVCASRMGGTAGRYLSNVAKVIKLPLLD
IGINIWSLYDSSLNHAKATTQIEYISTAIDVSFSSINTALSIGAIAYPPLAIAIVPITIF
SHEVKNYAVYVNQINERHKLWLEAEKYLDNGSAKVLSINKATGIIDLSNNQVLGNIYLDM
RENPPILHGEKSYNSGKNIGSHPDMTDREIMESRAYNFACTKLSDAGEPDIFGWGDKEIC
NSMELSESQLANGYSNRQWPSQIPVIPEGIYNTVYLGYGETLRANTEVTLSSTGYFYEIA
RAYTDDELSEPLLTVCNQHSHVIGGKEPLTIIIPAIEHGMLGSNLHMIERFKNYNFSISG
GKGGIKLMVGGIGDYNIECTPGVRNIISFEQLSRDFNLDLDLSDGRKQNFNFHHPSGFYS
GKVMSITQKGINAVVGTKLGYDKIRGNNLDNTFSLGSGGGVIYSGGGSNTYFVPATLQDN
LHIYISEKSNGNHIILGDMHSRLSIECHFSNNEREFIKMGYYNGCDVILESDTIQKIKSF
AKNITIQTADGVMANWDDKLNTLSVYSIDMIAWRDKNKTAKEPLPVDVIQLTNWRMHNTC
SLFYDKYQVDIEANKLTYTVLFPDTELPVQLNYTSIIYGNHGAKYTFLNSGSKTIDIHIL
DKNSDYDTFDFRNIIFEHYTNEIFISFDNQGGFVISILNNATSEAANINVFRKNMTSLDS
SGSLIYLPSGDIYHISDIYKMSRGRKSFKLNVEKKPDIDDIINVAILETSYLQIKKIPNN
DDSDYILCLDNPNLSSYTLNFNDLSGYISSLWDNIRGSFTPFHKNTVNIAPNEKKYISLI
GLDKLSFNIDVFRQALEVKNKNSYKISKFTWETYGDIVVSPEDRISHLELDGFNYFSQPE
LDTPISDSFSYLYDNFQIVDSDVHIKLLHLNRETKQITPHRIILKRYFIDSFAKTSITDR
EKNIYPVICDSPDHFTSDIYRHPFRIVLGNKTLYPSEELVKFISTSKEYLSNMDVINNVI
VPQKTTKKNKLSIVSLNSNIKNDIVLSGVMTGTSKIFHLNNSGDLLLTTSKTHGGGVVVI
FKDFINNWWKYNLTLITVPIDNKLSDNRINITPMGIKIQETVSGNDRLFFYPTPLKNGCF
ILHNPLYSNSFPSLYSHELFDLIEAYRNPTYSYLQNNIINRYIHTVSEYAGKDGIANMSL
SIYAYSTCRFWSKESVAVGDTIKLSNYEHIEFSFNSFSKDYFREQNSDIYKIFFKIASSS
NSVVVDKNTLTQKNFLENNTFFSITGIDESLYEKHIIFITLKVIVPSKK

>TRAJ3_ECOLX traJ P13949 TraJ [Escherichia coli] (Adhesion_invasion)
MCALDRRERPLNSQSVNKYILNVQNIYRNSPVPVCVRNKNRKILYANGAFIELFSREDKP
LSGESYIRLQVEIFLSSLELECQALGHGSAFCRRFNFHGEIYQIRMENVSFYNDESVVLW
QINPFPDYPFFALNQSGSNTNTSDKLTIWNDLSPGTLVVFSFYMLGVGHATIARELGITD
RASEDRIKPVKRKIKEFFEHV

Loading

0 comments on commit aa400ab

Please sign in to comment.