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Add examples of running MXNet with Horovod (apache#14286)
* Add examples for MXNet with Horovod * update readme * update examples * update README * update mnist_module example * Update README * update README * update README * update README
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<!--- Licensed to the Apache Software Foundation (ASF) under one --> | ||
<!--- or more contributor license agreements. See the NOTICE file --> | ||
<!--- distributed with this work for additional information --> | ||
<!--- regarding copyright ownership. The ASF licenses this file --> | ||
<!--- to you under the Apache License, Version 2.0 (the --> | ||
<!--- "License"); you may not use this file except in compliance --> | ||
<!--- with the License. You may obtain a copy of the License at --> | ||
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<!--- http://www.apache.org/licenses/LICENSE-2.0 --> | ||
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<!--- Unless required by applicable law or agreed to in writing, --> | ||
<!--- software distributed under the License is distributed on an --> | ||
<!--- "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY --> | ||
<!--- KIND, either express or implied. See the License for the --> | ||
<!--- specific language governing permissions and limitations --> | ||
<!--- under the License. --> | ||
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# Distributed Training using MXNet with Horovod | ||
[Horovod](https://github.com/horovod/horovod) is a distributed training framework that demonstrates | ||
excellent scaling efficiency for dense models running on a large number of nodes. It currently | ||
supports mainstream deep learning frameworks such as MXNet, TensorFlow, Keras, and PyTorch. | ||
It is created at Uber and currently hosted by the [Linux Foundation Deep Learning](https://lfdl.io)(LF DL). | ||
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MXNet is supported in Horovod 0.16.0 [release](https://eng.uber.com/horovod-pyspark-apache-mxnet-support/). | ||
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## What's New? | ||
Compared with the standard distributed training script in MXNet which uses parameter server to | ||
distribute and aggregate parameters, Horovod uses ring allreduce and/or tree-based allreduce algorithm | ||
to communicate parameters between workers. There is no dedicated server and the communication data size | ||
between workers does not depend on the number of workers. Therefore, it scales well in the case where | ||
there are a large number of workers and network bandwidth is the bottleneck. | ||
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# Install | ||
## Install MXNet | ||
```bash | ||
$ pip install mxnet | ||
``` | ||
**Note**: There is a [known issue](https://github.com/horovod/horovod/issues/884) when running Horovod with MXNet on a Linux system with GCC version 5.X and above. We recommend users to build MXNet from source following this [guide](https://mxnet.incubator.apache.org/install/build_from_source.html) as a workaround for now. Also mxnet-mkl package in 1.4.0 release does not support Horovod. | ||
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## Install Horovod | ||
```bash | ||
$ pip install horovod | ||
``` | ||
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This basic installation is good for laptops and for getting to know Horovod. | ||
If you're installing Horovod on a server with GPUs, read the [Horovod on GPU](https://github.com/horovod/horovod/blob/master/docs/gpus.md) page. | ||
If you want to use Docker, read the [Horovod in Docker](https://github.com/horovod/horovod/blob/master/docs/docker.md) page. | ||
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## Install MPI | ||
MPI is required to run distributed training with Horovod. Install [Open MPI](https://www.open-mpi.org/) or another MPI implementation. | ||
Steps to install Open MPI are listed [here](https://www.open-mpi.org/faq/?category=building#easy-build). | ||
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**Note**: Open MPI 3.1.3 has an issue that may cause hangs. It is recommended | ||
to downgrade to Open MPI 3.1.2 or upgrade to Open MPI 4.0.0. | ||
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# Usage | ||
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To run MXNet with Horovod, make the following additions to your training script: | ||
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1. Run `hvd.init()`. | ||
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2. Pin the context to a processor using `hvd.local_rank()`. | ||
Typically, each Horovod worker is associated with one process. The local rank is a unique ID specifically | ||
for all processes running Horovod job on the same node. | ||
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3. Scale the learning rate by number of workers. Effective batch size in synchronous distributed training is scaled by | ||
the number of workers. An increase in learning rate compensates for the increased batch size. | ||
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4. Wrap optimizer in `hvd.DistributedOptimizer`. The distributed optimizer delegates gradient computation | ||
to the original optimizer, averages gradients using *allreduce* or *allgather*, and then applies those averaged | ||
gradients. | ||
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5. Add `hvd.broadcast_parameters` to broadcast initial variable states from rank 0 to all other processes. | ||
This is necessary to ensure consistent initialization of all workers when training is started with random weights or | ||
restored from a checkpoint. | ||
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# Example | ||
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Here we provide the building blocks to train a model using MXNet with Horovod. | ||
The full examples are in [MNIST](gluon_mnist.py) and [ImageNet](resnet50_imagenet.py). | ||
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## Gluon API | ||
```python | ||
from mxnet import autograd, gluon | ||
import mxnet as mx | ||
import horovod.mxnet as hvd | ||
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# Initialize Horovod | ||
hvd.init() | ||
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# Set context to current process | ||
context = mx.cpu(hvd.local_rank()) if args.no_cuda else mx.gpu(hvd.local_rank()) | ||
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num_workers = hvd.size() | ||
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# Build model | ||
model = ... | ||
model.hybridize() | ||
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# Define hyper parameters | ||
optimizer_params = ... | ||
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# Add Horovod Distributed Optimizer | ||
opt = mx.optimizer.create('sgd', **optimizer_params) | ||
opt = hvd.DistributedOptimizer(opt) | ||
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# Initialize parameters | ||
model.initialize(initializer, ctx=context) | ||
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# Fetch and broadcast parameters | ||
params = model.collect_params() | ||
if params is not None: | ||
hvd.broadcast_parameters(params, root_rank=0) | ||
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# Create trainer and loss function | ||
trainer = gluon.Trainer(params, opt, kvstore=None) | ||
loss_fn = ... | ||
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# Train model | ||
for epoch in range(num_epoch): | ||
train_data.reset() | ||
for nbatch, batch in enumerate(train_data, start=1): | ||
data = batch.data[0].as_in_context(context) | ||
label = batch.label[0].as_in_context(context) | ||
with autograd.record(): | ||
output = model(data.astype(dtype, copy=False)) | ||
loss = loss_fn(output, label) | ||
loss.backward() | ||
trainer.step(batch_size) | ||
``` | ||
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## Module API | ||
```python | ||
import mxnet as mx | ||
import horovod.mxnet as hvd | ||
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# Initialize Horovod | ||
hvd.init() | ||
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# Set context to current process | ||
context = mx.cpu(hvd.local_rank()) if args.no_cuda else mx.gpu(hvd.local_rank()) | ||
num_workers = hvd.size() | ||
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# Build model | ||
model = ... | ||
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# Define hyper parameters | ||
optimizer_params = ... | ||
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# Add Horovod Distributed Optimizer | ||
opt = mx.optimizer.create('sgd', **optimizer_params) | ||
opt = hvd.DistributedOptimizer(opt) | ||
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# Initialize parameters | ||
initializer = mx.init.Xavier(rnd_type='gaussian', factor_type="in", | ||
magnitude=2) | ||
model.bind(data_shapes=train_data.provide_data, | ||
label_shapes=train_data.provide_label) | ||
model.init_params(initializer) | ||
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# Fetch and broadcast parameters | ||
(arg_params, aux_params) = model.get_params() | ||
if arg_params: | ||
hvd.broadcast_parameters(arg_params, root_rank=0) | ||
if aux_params: | ||
hvd.broadcast_parameters(aux_params, root_rank=0) | ||
model.set_params(arg_params=arg_params, aux_params=aux_params) | ||
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# Train model | ||
model.fit(train_data, | ||
kvstore=None, | ||
optimizer=opt, | ||
num_epoch=num_epoch) | ||
``` | ||
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# Running Horovod | ||
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The example commands below show how to run distributed training. See the | ||
[Running Horovod](https://github.com/horovod/horovod/blob/master/docs/running.md) | ||
page for more instructions, including RoCE/InfiniBand tweaks and tips for dealing with hangs. | ||
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1. To run on a machine with 4 CPUs: | ||
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```bash | ||
$ mpirun -np 4 \ | ||
-H localhost:4 \ | ||
-bind-to none -map-by slot \ | ||
python train.py | ||
``` | ||
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2. To run on 2 machines with 4 GPUs each: | ||
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```bash | ||
$ mpirun -np 8 \ | ||
-H server1:4,server2:4 \ | ||
-bind-to none -map-by slot \ | ||
-x NCCL_DEBUG=INFO \ | ||
-mca pml ob1 -mca btl ^openib \ | ||
python train.py | ||
``` |
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# Licensed to the Apache Software Foundation (ASF) under one | ||
# or more contributor license agreements. See the NOTICE file | ||
# distributed with this work for additional information | ||
# regarding copyright ownership. The ASF licenses this file | ||
# to you under the Apache License, Version 2.0 (the | ||
# "License"); you may not use this file except in compliance | ||
# with the License. You may obtain a copy of the License at | ||
# | ||
# http://www.apache.org/licenses/LICENSE-2.0 | ||
# | ||
# Unless required by applicable law or agreed to in writing, | ||
# software distributed under the License is distributed on an | ||
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY | ||
# KIND, either express or implied. See the License for the | ||
# specific language governing permissions and limitations | ||
# under the License. | ||
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import argparse | ||
import logging | ||
import os | ||
import zipfile | ||
import time | ||
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import mxnet as mx | ||
import horovod.mxnet as hvd | ||
from mxnet import autograd, gluon, nd | ||
from mxnet.test_utils import download | ||
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# Training settings | ||
parser = argparse.ArgumentParser(description='MXNet MNIST Example') | ||
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parser.add_argument('--batch-size', type=int, default=64, | ||
help='training batch size (default: 64)') | ||
parser.add_argument('--dtype', type=str, default='float32', | ||
help='training data type (default: float32)') | ||
parser.add_argument('--epochs', type=int, default=5, | ||
help='number of training epochs (default: 5)') | ||
parser.add_argument('--lr', type=float, default=0.01, | ||
help='learning rate (default: 0.01)') | ||
parser.add_argument('--momentum', type=float, default=0.9, | ||
help='SGD momentum (default: 0.9)') | ||
parser.add_argument('--use-gpu', action='store_true', default=False, | ||
help='run training on GPU (default: False)') | ||
args = parser.parse_args() | ||
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logging.basicConfig(level=logging.INFO) | ||
logging.info(args) | ||
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# Function to get mnist iterator given a rank | ||
def get_mnist_iterator(rank): | ||
data_dir = "data-%d" % rank | ||
if not os.path.isdir(data_dir): | ||
os.makedirs(data_dir) | ||
zip_file_path = download('http://data.mxnet.io/mxnet/data/mnist.zip', | ||
dirname=data_dir) | ||
with zipfile.ZipFile(zip_file_path) as zf: | ||
zf.extractall(data_dir) | ||
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input_shape = (1, 28, 28) | ||
batch_size = args.batch_size | ||
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train_iter = mx.io.MNISTIter( | ||
image="%s/train-images-idx3-ubyte" % data_dir, | ||
label="%s/train-labels-idx1-ubyte" % data_dir, | ||
input_shape=input_shape, | ||
batch_size=batch_size, | ||
shuffle=True, | ||
flat=False, | ||
num_parts=hvd.size(), | ||
part_index=hvd.rank() | ||
) | ||
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val_iter = mx.io.MNISTIter( | ||
image="%s/t10k-images-idx3-ubyte" % data_dir, | ||
label="%s/t10k-labels-idx1-ubyte" % data_dir, | ||
input_shape=input_shape, | ||
batch_size=batch_size, | ||
flat=False, | ||
) | ||
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return train_iter, val_iter | ||
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# Function to define neural network | ||
def conv_nets(): | ||
net = gluon.nn.HybridSequential() | ||
with net.name_scope(): | ||
net.add(gluon.nn.Conv2D(channels=20, kernel_size=5, activation='relu')) | ||
net.add(gluon.nn.MaxPool2D(pool_size=2, strides=2)) | ||
net.add(gluon.nn.Conv2D(channels=50, kernel_size=5, activation='relu')) | ||
net.add(gluon.nn.MaxPool2D(pool_size=2, strides=2)) | ||
net.add(gluon.nn.Flatten()) | ||
net.add(gluon.nn.Dense(512, activation="relu")) | ||
net.add(gluon.nn.Dense(10)) | ||
return net | ||
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# Function to evaluate accuracy for a model | ||
def evaluate(model, data_iter, context): | ||
data_iter.reset() | ||
metric = mx.metric.Accuracy() | ||
for _, batch in enumerate(data_iter): | ||
data = batch.data[0].as_in_context(context) | ||
label = batch.label[0].as_in_context(context) | ||
output = model(data.astype(args.dtype, copy=False)) | ||
metric.update([label], [output]) | ||
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return metric.get() | ||
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# Initialize Horovod | ||
hvd.init() | ||
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# Horovod: pin context to local rank | ||
context = mx.gpu(hvd.local_rank()) if args.use_gpu else mx.cpu(hvd.local_rank()) | ||
num_workers = hvd.size() | ||
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# Load training and validation data | ||
train_data, val_data = get_mnist_iterator(hvd.rank()) | ||
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# Build model | ||
model = conv_nets() | ||
model.cast(args.dtype) | ||
model.hybridize() | ||
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# Define hyper parameters | ||
optimizer_params = {'momentum': args.momentum, | ||
'learning_rate': args.lr * hvd.size(), | ||
'rescale_grad': 1.0 / args.batch_size} | ||
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# Add Horovod Distributed Optimizer | ||
opt = mx.optimizer.create('sgd', **optimizer_params) | ||
opt = hvd.DistributedOptimizer(opt) | ||
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# Initialize parameters | ||
initializer = mx.init.Xavier(rnd_type='gaussian', factor_type="in", | ||
magnitude=2) | ||
model.initialize(initializer, ctx=context) | ||
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# Fetch and broadcast parameters | ||
params = model.collect_params() | ||
if params is not None: | ||
hvd.broadcast_parameters(params, root_rank=0) | ||
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# Create trainer, loss function and train metric | ||
trainer = gluon.Trainer(params, opt, kvstore=None) | ||
loss_fn = gluon.loss.SoftmaxCrossEntropyLoss() | ||
metric = mx.metric.Accuracy() | ||
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# Train model | ||
for epoch in range(args.epochs): | ||
tic = time.time() | ||
train_data.reset() | ||
metric.reset() | ||
for nbatch, batch in enumerate(train_data, start=1): | ||
data = batch.data[0].as_in_context(context) | ||
label = batch.label[0].as_in_context(context) | ||
with autograd.record(): | ||
output = model(data.astype(args.dtype, copy=False)) | ||
loss = loss_fn(output, label) | ||
loss.backward() | ||
trainer.step(args.batch_size) | ||
metric.update([label], [output]) | ||
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if nbatch % 100 == 0: | ||
name, acc = metric.get() | ||
logging.info('[Epoch %d Batch %d] Training: %s=%f' % | ||
(epoch, nbatch, name, acc)) | ||
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if hvd.rank() == 0: | ||
elapsed = time.time() - tic | ||
speed = nbatch * args.batch_size * hvd.size() / elapsed | ||
logging.info('Epoch[%d]\tSpeed=%.2f samples/s\tTime cost=%f', | ||
epoch, speed, elapsed) | ||
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# Evaluate model accuracy | ||
_, train_acc = metric.get() | ||
name, val_acc = evaluate(model, val_data, context) | ||
if hvd.rank() == 0: | ||
logging.info('Epoch[%d]\tTrain: %s=%f\tValidation: %s=%f', epoch, name, | ||
train_acc, name, val_acc) | ||
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if hvd.rank() == 0 and epoch == args.epochs - 1: | ||
assert val_acc > 0.96, "Achieved accuracy (%f) is lower than expected\ | ||
(0.96)" % val_acc |
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