Analysis Repository for the YeastPhosphoAtlas

This repository is home to our preprocessing scripts and notebooks which support the analysis in the YeastPhosphoAtlas manuscript and web portal. Preprocessing was performed through a Snakemake pipeline, and we are actively working on making the anaylsis reproducible with a single script. Individual sections of our analysis can be found as R notebooks under the notebook directory and resulting output files can be found under the notebook/output subdirectory.