This repository contains some sample in vitro data for CaBBI method (Rahmati et al. 2016).
Most of these data have been originally published in: Rahmati V, Kirmse K, Markovic D, Holthoff K, Kiebel SJ (2016). Inferring Neuronal Dynamics from Calcium Imaging Data Using Biophysical Models and Bayesian Inference. PLoS Comput Biol, 12(2)
The link to the original data: https://figshare.com/s/e524c1d214d411e5869c06ec4b8d1f61
More information: In (Rahmati et al. 2016), we proposed a new method for calcium imaging analysis based on the biophysical models of spiking neurons and Bayesian inference; we called our method CaBBI. This method has been implemented as Matlab code in the VBA toolbox (http://mbb-team.github.io/VBA-toolbox/), and is now publicly available as a part of this toolbox (http://mbb-team.github.io/VBA-toolbox/wiki/CaBBI/).