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Examples of installed services

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Jean-François edited this page Aug 19, 2021 · 42 revisions

Several TreePattern and InTreeGreat services are already in production, in different databases:

  • A TreePattern service, embedded in the GreenPhylDB5 database, available here.
  • A TreePattern service, included in the Grass Genome Hub, is available here.

Results visualizator of a tree pattern match in HOGENOM

  • A TreePattern service, included in the HOGENOM 7 database (1,000,000 gene families, results displayed by a specific HOGENOM visualizator), at the bottom of this page.

Results visualizator of a tree pattern match in HOGENOM

  • A TreePattern service, a very simple implementation, on several green crops tree databases, available here.

  • Simple example of InTreeGreat display, on a customed plant family, available here.

  • The nsLTPs family (thanks to MSD-Mind project, ANR Genoplant), including functional annotations, available here.
  • A more prospective InTreeGreat example, including micro-syntenies (in collaboration with Genomicus team), available here.

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