Scripts used to test the expression ratios including X to autosomes (X:AA ratio) and X to orthologs (X:XX ratio) at the transcriptome, translatome, and proteome levels, used in the paper:
Qian SH, Xiong YL, Chen L, Geng YJ, Tang XM, Chen ZX. Dynamic Spatial-temporal Expression Ratio of X Chromosome to Autosomes but Stable Dosage Compensation in Mammals. Genomics, Proteomics & Bioinformatics, 2022. Link: https://www.sciencedirect.com/science/article/pii/S1672022922000973, doi: 10.1016/j.gpb.2022.08.003.