Dds 1473 GitHub Actions not able to generate the documentation

[rv0lt]

Before submitting this PR

1. Description: The GitHub Actions to generate the documentation wasn't working. The issue was found to be in a problem with the dependencies. The container need certain modules and libraries to be installed. As well as proper modules to convert the svg images.
2. Jira task / GitHub issue: https://scilifelab.atlassian.net/browse/DDS-1473
3. How to test: Trigger the actions
4. Type of change: Check the relevant boxes in the section below
5. Add docstrings and comments to code, even if you personally think it's obvious.

What type of change(s) does the PR contain?

• New feature
  • Breaking: Please describe the reason for the break and how we can fix it.
  • Non-breaking
• Bug fix
  • Breaking: Please describe the reason for the break and how we can fix it.
  • Non-breaking
• Security Alert fix
• Documentation
• Tests (only)
• Workflow

Checklist

• Sprintlog
  • Added
  • Not needed (E.g. PR contains only tests)
• Rebase / Update / Merge from base branch (the branch from which the current is forked)
  • Done
  • Not needed
• Blocking PRs
  • Merged
  • No blocking PRs
• PR to master branch
  • Yes: Read the release instructions
    • I have followed steps 1-7.
  • No

Actions / Scans

• Black: Python code formatter. Does not execute. Only tests.
  Run black . locally to execute formatting.
  • Passed
• Pylint: Python code linter. Does not execute. Only tests.
  Fix code producing warnings. Code must get 10/10.
  • Warnings fixed
  • Passed
• Prettier: General code formatter. Our use case: MD and yaml mainly.
  Run npx prettier --write . locally to execute formatting.
  • Passed
• Yamllint: Linting of yaml files.
  • Passed
• Tests: Pytest to verify that functionality works as expected.
  • New tests added
  • No new tests
  • Passed
• TestPyPi: Build CLI and publish to TestPyPi in order to verify before release.
  • Passed
• CodeQL: Scan for security vulnerabilities, bugs, errors
  • New alerts: Go through them and either fix, dismiss och ignore. Add reasoning in items below.
  • Alerts fixed: What?
  • Alerts ignored / dismissed: Why?
  • Passed
• Trivy: Security scanner
  • New alerts: Go through them and either fix, dismiss och ignore. Add reasoning in items below.
  • Alerts fixed: What?
  • Alerts ignored / dismissed: Why?
  • Passed
• Snyk: Security scanner
  • New alerts: Go through them and either fix, dismiss och ignore. Add reasoning in items below.
  • Alerts fixed: What?
  • Alerts ignored / dismissed: Why?
  • Passed

[codecov]

Codecov Report

Merging #650 (5658a54) into dev (cb32c16) will increase coverage by 0.10%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##              dev     #650      +/-   ##
==========================================
+ Coverage   46.63%   46.74%   +0.10%     
==========================================
  Files          31       31              
  Lines        2792     2792              
==========================================
+ Hits         1302     1305       +3     
+ Misses       1490     1487       -3     

see 1 file with indirect coverage changes

[rv0lt]

The build won't work unless there is a release due to this parameter:

upload_url: ${{ github.event.release.upload_url }}

However, the fails that were occurring before that point are solved.

[i-oden]

Nice! I just have a couple of questions.

[i-oden]

And also add a sprintlog row btw

[i-oden]

Good job solving this! Approved, you can merge

[rv0lt]

Good job solving this! Approved, you can merge

It says The base branch restricts merging to authorized users

[i-oden]

Good job solving this! Approved, you can merge

It says The base branch restricts merging to authorized users

Aha.. Interesting. I'll merge then, and check if we have different settings for the dds_cli and dds_web