migrate travis-ci to cirrus-ci #66

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Merged

lbdreyer merged 4 commits into SciTools:master from bjlittle:migrate-travis-ci-to-cirrus-ci

Jun 10, 2021

.cirrus.yml

-Original file line number
+Diff line change
@@ -0,0 +1,101 @@
+    # Reference:
+    #   - https://cirrus-ci.org/guide/writing-tasks/
+    #   - https://cirrus-ci.org/guide/linux/
+    #   - https://hub.docker.com/_/gcc/
+    #   - https://hub.docker.com/_/python/
+    #
+    # Global defaults.
+    #
+    container:
+      image: python:latest
+      cpu: 2
+      memory: 4G
+    env:
+      # Maximum cache period (in weeks) before forcing a new cache upload.
+      CACHE_PERIOD: "2"
+      # Increment the build number to force new mambaforge cache upload.
+      MAMBA_CACHE_BUILD: "0"
+      # Increment the build number to force new mint cache upload.
+      NCTA_CACHE_BUILD: "0"
+      # Base environment conda packages to be installed
+      MAMBA_CACHE_PACKAGES: "pip conda-lock"
+      # Increment the build number to forve new pip cache upload.
+      PIP_CACHE_BUILD: "0"
+      # Linting packages to be installed.
+      PIP_CACHE_PACKAGES: "black flake8 isort"
+    #
+    # Linting
+    #
+    lint_task:
+      auto_cancellation: true
+      name: "${CIRRUS_OS}: linting"
+      pip_cache:
+        folder: ~/.cache/pip
+        fingerprint_script:
+          - echo "${CIRRUS_TASK_NAME} py${PYTHON_VERSION}"
+          - echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${PIP_CACHE_BUILD} ${PIP_CACHE_PACKAGES}"
+      lint_script:
+        - pip list
+        - python -m pip install --retries 3 --upgrade ${PIP_CACHE_PACKAGES}
+        - pip list
+        - black --check ${CIRRUS_WORKING_DIR}
+        - flake8 ${CIRRUS_WORKING_DIR}
+        - isort --check ${CIRRUS_WORKING_DIR}
+    #
+    # Testing (Linux)
+    #
+    linux_task:
+      auto_cancellation: true
+      matrix:
+        env:
+          PY_VER: "3.7"
+        env:
+          PY_VER: "3.8"
+        env:
+          PY_VER: "3.9"
+          COVERAGE: "codecov"
+      name: "${CIRRUS_OS}: py${PY_VER}"
+      container:
+        image: gcc:latest
+      env:
+        PATH: ${HOME}/mambaforge/bin:${PATH}
+      mamba_cache:
+        folder: ${HOME}/mambaforge
+        fingerprint_script:
+          - wget --quiet https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O mambaforge.sh
+          - echo "${CIRRUS_OS} $(sha256sum mambaforge.sh)"
+          - echo "${MAMBA_CACHE_PACKAGES}"
+          - echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${MAMBA_CACHE_BUILD}"
+        populate_script:
+          - bash mambaforge.sh -b -p ${HOME}/mambaforge
+          - conda config --set always_yes yes --set changeps1 no
+          - conda config --set show_channel_urls True
+          - conda config --add channels conda-forge
+          - conda install --quiet --name base ${MAMBA_CACHE_PACKAGES}
+      check_script:
+        - conda info --all
+        - conda list --name base
+      ncta_cache:
+        folder: ${HOME}/mambaforge/envs/py${PY_VER}
+        fingerprint_script:
+          - echo "${CIRRUS_OS} py${PY_VER} tests"
+          - echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${NCTA_CACHE_BUILD}"
+          - cat ${CIRRUS_WORKING_DIR}/requirements/py$(echo ${PY_VER} | tr -d ".").yml
+        populate_script:
+          - conda-lock --mamba --platform linux-64 --file ${CIRRUS_WORKING_DIR}/requirements/py$(echo ${PY_VER} | tr -d ".").yml
+          - mamba create --name py${PY_VER} --quiet --file conda-linux-64.lock
+          - cp conda-linux-64.lock ${HOME}/mambaforge/envs/py${PY_VER}
+      test_script:
+        - cat ${HOME}/mambaforge/envs/py${PY_VER}/conda-linux-64.lock >&2
+        - source ${HOME}/mambaforge/etc/profile.d/conda.sh >/dev/null 2>&1
+        - conda activate py${PY_VER} >/dev/null 2>&1
+        - pip install --no-deps --editable .
+        - pytest --cov-report=xml --cov
+        - ${COVERAGE}

.coveragerc

-Original file line number
+Diff line change
@@ Expand Up / @@ -3,12 +3,12 @@ @@
     #
     [run]
-    source = nc_time_axis
     branch = True
+    source = nc_time_axis
     omit =
         nc_time_axis/_version.py
         nc_time_axis/tests/*
+        setup.py
     [report]
     exclude_lines =
@@ Expand Down @@

.flake8

-Original file line number
+Diff line change
@@ -0,0 +1,28 @@
+    [flake8]
+    # References:
+    #   https://flake8.readthedocs.io/en/latest/user/configuration.html
+    #   https://flake8.readthedocs.io/en/latest/user/error-codes.html
+    #   https://pycodestyle.readthedocs.io/en/latest/intro.html#error-codes
+    select = C,E,F,W,B,B950
+    ignore =
+        # E203: whitespace before ':'
+        E203,
+        # E226: missing whitespace around arithmetic operator
+        E226,
+        # E231: missing whitespace after ',', ';', or ':'
+        E231,
+        # E402: module level imports on one line
+        E402,
+        # E501: line too long
+        E501,
+        # E731: do not assign a lambda expression, use a def
+        E731,
+        # W503: line break before binary operator
+        W503,
+        # W504: line break after binary operator
+        W504
+    exclude =
+        .eggs
+        build

.gitignore

-Original file line number
+Diff line change
@@ -1,26 +1,43 @@
+    # Directory-based project format:
+    .idea/
+    # Created by editors
+    *~
+    \#*
+    \.\#*
+    *.swp
+    # setuptools-scm
+    _version.py
     # Byte-compiled / optimized / DLL files
     __pycache__/
     *.py[cod]
+    *$py.class
     # C extensions
     *.so
     # Distribution / packaging
     .Python
-    env/
     build/
     develop-eggs/
     dist/
     downloads/
     eggs/
     .eggs/
+    lib/
     lib64/
     parts/
     sdist/
     var/
+    wheels/
+    pip-wheel-metadata/
+    share/python-wheels/
     *.egg-info/
     .installed.cfg
     *.egg
+    MANIFEST
     # PyInstaller
     #  Usually these files are written by a python script from a template
@@ Expand All / @@ -35,28 +52,90 @@ pip-delete-this-directory.txt @@
     # Unit test / coverage reports
     htmlcov/
     .tox/
+    .nox/
     .coverage
     .coverage.*
     .cache
     nosetests.xml
     coverage.xml
-    *,cover
+    *.cover
+    *.py,cover
+    .hypothesis/
+    .pytest_cache/
     # Translations
     *.mo
     *.pot
     # Django stuff:
     *.log
+    local_settings.py
+    db.sqlite3
+    db.sqlite3-journal
+    # Flask stuff:
+    instance/
+    .webassets-cache
+    # Scrapy stuff:
+    .scrapy
     # Sphinx documentation
     docs/_build/
     # PyBuilder
     target/
-    # Created by editiors
-    *~
-    \#*
-    \.\#*
-    *.swp
+    # Jupyter Notebook
+    .ipynb_checkpoints
+    # IPython
+    profile_default/
+    ipython_config.py
+    # pyenv
+    .python-version
+    # pipenv
+    #   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+    #   However, in case of collaboration, if having platform-specific dependencies or dependencies
+    #   having no cross-platform support, pipenv may install dependencies that don't work, or not
+    #   install all needed dependencies.
+    #Pipfile.lock
+    # PEP 582; used by e.g. github.com/David-OConnor/pyflow
+    __pypackages__/
+    # Celery stuff
+    celerybeat-schedule
+    celerybeat.pid
+    # SageMath parsed files
+    *.sage.py
+    # Environments
+    .env
+    .venv
+    env/
+    venv/
+    ENV/
+    env.bak/
+    venv.bak/
+    # Spyder project settings
+    .spyderproject
+    .spyproject
+    # Rope project settings
+    .ropeproject
+    # mkdocs documentation
+    /site
+    # mypy
+    .mypy_cache/
+    .dmypy.json
+    dmypy.json
+    # Pyre type checker
+    .pyre/

.pre-commit-config.yaml

-Original file line number
+Diff line change
@@ -0,0 +1,37 @@
+    # See https://pre-commit.com for more information
+    # See https://pre-commit.com/hooks.html for more hooks
+    repos:
+    -   repo: https://github.com/pre-commit/pre-commit-hooks
+        rev: 'v4.0.1'
+        hooks:
+            # Prevent giant files from being committed.
+        -   id: check-added-large-files
+            # Check whether files parse as valid Python.
+        -   id: check-ast
+            # Check for file name conflicts on case-insensitive filesytems.
+        -   id: check-case-conflict
+            # Check for files that contain merge conflict strings.
+        -   id: check-merge-conflict
+            # Check for debugger imports and py37+ `breakpoint()` calls in Python source.
+        -   id: debug-statements
+            # Don't commit to master branch.
+        -   id: no-commit-to-branch
+    -   repo: https://github.com/psf/black
+        rev: '21.5b2'
+        hooks:
+        -   id: black
+            # Force black to run on whole repo, using settings from pyproject.toml
+            pass_filenames: false
+            args: [--config=./pyproject.toml, .]
+    -   repo: https://github.com/PyCQA/flake8
+        rev: '3.9.2'
+        hooks:
+            # Run flake8.
+        -   id: flake8
+            args: [--config=./.flake8]
+    -   repo: https://github.com/pycqa/isort
+        rev: '5.8.0'
+        hooks:
+        -   id: isort
+            name: isort
+            args: ["--profile", "black", "--filter-files"]

.travis.yml

This file was deleted.

MANIFEST.in

-Original file line number
+Diff line change
@@ -1,3 +1,4 @@
     include LICENSE
-    include versioneer.py
-    include nc_time_axis/_version.py
+    recursive-include nc_time_axis/tests *.py
+    graft requirements

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