Introduce Integration Tests #761
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1. .github/workflows/integration-test-workflow.yml:11
- Draft comment:
Consider using more secure, non-default values forPOSTGRES_USER,POSTGRES_PASSWORD, andPOSTGRES_DBNAMEeven in testing environments to promote better security practices. - Reason this comment was not posted:
Confidence changes required:33%
The environment variables for the PostgreSQL database are set with default values, which might not be secure, especially for production environments. However, since this is a testing environment, it might be acceptable. Still, it's good practice to avoid using default passwords even in test environments to promote security best practices.
2. .github/workflows/integration-test-workflow.yml:18
- Draft comment:
Ensure that using a self-hosted runner complies with the organization's security policies and infrastructure capabilities. - Reason this comment was not posted:
Confidence changes required:33%
The workflow uses a self-hosted runner which might have implications on security and resource management depending on where and how it's hosted. This should be reviewed to ensure it aligns with the organization's security policies and infrastructure capabilities.
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| timeout 60s bash -c 'until docker exec postgres pg_isready -U ${POSTGRES_USER}; do sleep 5; done' | ||
| timeout 60s bash -c 'until curl -f http://localhost:8000/v1/health; do sleep 5; done' | ||
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| - name: Run integration tests |
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Define and execute actual integration tests in the 'Run integration tests' step to ensure the application's components work together as expected.
Codecov ReportAll modified and coverable lines are covered by tests ✅ |
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| on: | ||
| push: | ||
| branches: [ main ] | ||
| pull_request: |
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The pull_request trigger is missing a branch filter. This might cause the workflow to run on pull requests targeting any branch, not just main. If the intent is to restrict this to main, consider adding the branch filter back:
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1. .github/workflows/integration-test-workflow.yml:47
- Draft comment:
Using plain environment variables for sensitive information likePOSTGRES_PASSWORDcan lead to security risks. Consider using GitHub Secrets to securely manage sensitive data.
-e POSTGRES_PASSWORD=${{ secrets.POSTGRES_PASSWORD }}
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1. .github/workflows/integration-test-workflow.yml:56
- Draft comment:
The environment variable for the PostgreSQL database name is incorrectly referenced in the R2R container startup command. It should bePOSTGRES_DBto match the environment variable used in the PostgreSQL container setup. This mismatch could prevent the R2R application from correctly connecting to the PostgreSQL database. - Reason this comment was not posted:
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1. .github/workflows/integration-test-workflow.yml:11
- Draft comment:
Consider the security implications of using a self-hosted runner, especially for public repositories. Ensure that the repository settings and project nature justify its use and that appropriate security measures are in place. - Reason this comment was not posted:
Confidence of 0% on close inspection, compared to threshold of 50%.
2. .github/workflows/integration-test-workflow.yml:26
- Draft comment:
Consider adding a timeout for the Docker container startup to prevent the job from hanging indefinitely in case of issues. This can help manage CI resources more effectively. - Reason this comment was not posted:
Confidence of 30% on close inspection, compared to threshold of 50%.
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| - name: Start containers | ||
| run: | | ||
| docker run -d --name postgres --network r2r-network \ | ||
| -e POSTGRES_USER=${POSTGRES_USER:-postgres} \ |
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Using default credentials (postgres for both username and password) can pose a security risk. Consider using GitHub secrets or environment variables to manage these credentials securely, even in a testing environment.
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| docker run -d --name r2r --network r2r-network \ | ||
| -e PYTHONUNBUFFERED=1 \ | ||
| -e OPENAI_API_KEY=${${{ secrets.OPENAI_API_KEY }}} \ |
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The environment variable OPENAI_API_KEY is incorrectly referenced. Remove the extra curly braces to correct the syntax.
| -e OPENAI_API_KEY=${${{ secrets.OPENAI_API_KEY }}} \ | |
| -e OPENAI_API_KEY=${{ secrets.OPENAI_API_KEY }} |
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1. .github/workflows/integration-test-workflow.yml:44
- Draft comment:
The syntax for accessing the GitHub secretOPENAI_API_KEYis incorrect. Use the correct format:
-e OPENAI_API_KEY=${{ secrets.OPENAI_API_KEY }}
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| - name: Start containers | ||
| run: | | ||
| docker run -d --name postgres --network r2r-network \ | ||
| -e POSTGRES_USER=postgres \ |
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Using hardcoded credentials for PostgreSQL in the integration test setup is a security risk. Consider using GitHub secrets or environment variables to manage these values securely.
This change should be applied to all instances where PostgreSQL credentials are set (lines 29-31, 37-41).
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1. .github/workflows/integration-test-workflow.yml:53
- Draft comment:
Ensure that the health check endpoint/v1/healthis correctly configured in the R2R application to respond to requests onlocalhost. - Reason this comment was not posted:
Confidence changes required:33%
The use oflocalhostin the health check command for the R2R container might be incorrect. In Docker,localhostrefers to the container itself, not the host machine. Since the R2R container is supposed to be checked from within itself, the use oflocalhostis correct. However, it's important to ensure that the health check endpoint is correctly specified and that the container is set up to respond onlocalhost.
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| docker logs r2r | ||
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| - name: View R2R container logs |
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The step to view R2R container logs is redundant since logs are already captured and displayed in the previous step. Consider removing this step to streamline the workflow.
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| run: | | ||
| docker build -t emrgntcmplxty/r2r:${{ github.sha }} . | ||
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| - name: Build R2R Docker image |
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The Docker image for R2R is being built twice with slightly different configurations (lines 16-18 and 20-25). This redundancy could lead to inconsistencies and resource wastage. Consider removing one of the build steps.
| - name: Build R2R Docker image | |
| # Remove this block to avoid duplicate builds |
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1. .github/workflows/integration-test-workflow.yml:55
- Draft comment:
There are duplicate steps for building the R2R Docker image. Consider removing one of the duplicate steps to streamline the workflow.
# Remove this duplicate step
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| -p 8000:8000 \ | ||
| emrgntcmplxty/r2r:${{ github.sha }} | ||
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| sleep 10 |
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Using sleep for waiting on service readiness is unreliable. Consider implementing a health check or a loop that checks service availability.
| sleep 10 | |
| # Implement a health check or readiness loop here |
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1. .github/workflows/integration-test-workflow.yml:103
- Draft comment:
There are duplicate steps for building the R2R Docker image (lines 27-30 and 31-36). Consider removing one of these steps to avoid redundancy and potential build conflicts.
# Remove duplicate Docker build step
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| pip install --upgrade r2r | ||
| shell: cmd | ||
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| - name: Build R2R Docker image |
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The workflow includes two separate steps for building the R2R Docker image (Build R2R Docker image and Build R2R Docker image with args). Consider combining these into a single step to avoid redundancy and save resources.
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1. .github/workflows/integration-test-workflow-windows.yml:11
- Draft comment:
Theruns-onvalue is incorrectly specified as an array. It should be a single string that correctly identifies the runner environment. For a Windows environment, you should usewindows-latestor a specific version likewindows-2019.
runs-on: windows-latest
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| r2r docker-down | ||
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| - name: Clean up |
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The cleanup step in this workflow only prunes Docker system resources but does not explicitly stop or remove the Docker containers used in the tests. This could lead to resource leakage on self-hosted runners.
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| - name: Install Ollama Models | ||
| run: | | ||
| docker exec r2r-ollama-1 ollama pull llama3 |
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The -it flags in docker exec commands should be removed to ensure compatibility with the non-interactive environment of GitHub Actions.
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1. .github/workflows/integration-test-workflow-debian.yml:39
- Draft comment:
There are duplicate steps for building the R2R Docker image in lines 27 and 31. Consider removing one to avoid redundancy and potential confusion. - Reason this comment was not posted:
Confidence of 0% on close inspection, compared to threshold of 50%.
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1. .github/workflows/integration-test-workflow-debian.yml:16
- Draft comment:
The workflow contains two steps both named "Build R2R Docker image" (lines 27 and 31). If this is intentional and both steps are required, consider renaming them for clarity. If one of the steps is redundant, consider removing it to streamline the workflow.
- name: Build R2R Docker image with args
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1. .github/workflows/local-integration-test-workflow-debian.yml:18
- Draft comment:
python3 -m venv $HOME/r2r_local_venv
Consider using python3 instead of python to ensure that Python 3 is used for the virtual environment, especially if the system might have Python 2 installed as well.
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1. .github/workflows/integration-test-workflow-debian.yml:11
- Draft comment:
Theruns-onfield should not be an array. Specify a single runner label that matches the intended environment. For example:
runs-on: ubuntu-latest
- Reason this comment was not posted:
Confidence of 0% on close inspection, compared to threshold of 50%.
2. .github/workflows/local-integration-test-workflow-debian.yml:11
- Draft comment:
Theruns-onfield should not be an array. Specify a single runner label that matches the intended environment. For example:
runs-on: ubuntu-latest
- Reason this comment was not posted:
Marked as duplicate.
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1. .github/workflows/local-integration-test-workflow-debian.yml:81
- Draft comment:
Consider ensuring that thedeactivatecommand is available in the context where it's used, or handle potential failures gracefully to ensure the cleanup process is robust. For example:
source $HOME/r2r_local_venv/bin/activate
if type deactivate > /dev/null; then
deactivate
fi
rm -rf $HOME/r2r_local_venv
docker system prune -af --volumes
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1. .github/workflows/integration-test-workflow-windows.yml:3
- Draft comment:
The triggers forpushandpull_requestevents are missing, which could lead to untested code being merged into the main branch. Consider adding these triggers to maintain consistency and ensure all code is tested before merging.
push:
branches: [ main ]
pull_request:
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| pip install --upgrade pip | ||
| pip install --upgrade r2r | ||
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| - name: Build R2R Docker image |
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There is a duplicated step for building the R2R Docker image. Please remove one of the duplicate steps to maintain clarity and efficiency in the workflow.
| - name: Build R2R Docker image | |
| # Remove this duplicated step |
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1. .github/workflows/local-integration-test-workflow-debian.yml:3
- Draft comment:
The workflow is now only triggered viaworkflow_dispatch, removing automated triggers onpushandpull_request. Ensure this is intentional as it limits automated testing capabilities. - Reason this comment was not posted:
Confidence changes required:33%
The workflow filelocal-integration-test-workflow-debian.ymlhas been modified to remove triggers forpushandpull_requestevents, leaving onlyworkflow_dispatch. This change restricts the workflow to be manually triggered, which might be intentional for local testing scenarios to avoid running on every push or pull request. However, this could limit automated testing capabilities if not intended.
Workflow ID: wflow_qOG3OG7SCHopYqKs
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Summary:
Introduce GitHub Actions workflows for integration testing of R2R application on Linux, Windows, and Debian with Docker setup for R2R and PostgreSQL, including Python virtual environment setup and various integration tests.
Key points:
.github/workflows/integration-test-workflow.ymlfor Linux integration testing..github/workflows/integration-test-workflow-windows.ymlfor Windows integration testing..github/workflows/integration-test-workflow-debian.ymlfor Debian integration testing..github/workflows/local-integration-test-workflow-debian.ymlfor local Debian integration testing.push,pull_request, andworkflow_dispatchevents tomainbranch.docker build.pgvector/pgvector:pg16Docker image for PostgreSQL.sciphi-network.pg_isreadyand health check endpoint.Generated with ❤️ by ellipsis.dev