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Machine uses perturbation class #60

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Merged
merged 57 commits into from
Jun 28, 2022
Merged

Machine uses perturbation class #60

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05f4e26
:sparkles: Developing PerturbationMatrix class
christinahedges Mar 30, 2022
172fbda
:white_check_mark: fixing flake8
christinahedges Mar 30, 2022
fb31d8b
:sparkles: added a 3D matrix
christinahedges Mar 31, 2022
d37a540
:art: fairly good sketch
christinahedges Apr 2, 2022
884f24d
Update src/psfmachine/perturbation.py
christinahedges Apr 5, 2022
18cca59
Update src/psfmachine/perturbation.py
christinahedges Apr 5, 2022
3df9bea
fixing identation and _clean_vectors when segments=True
jorgemarpa Apr 5, 2022
b64b9cc
:zap: faster!
christinahedges Apr 5, 2022
2d55aa1
:art: adding pixel masking
christinahedges Apr 5, 2022
7310ed3
:memo: added docstrings
christinahedges Apr 5, 2022
34d943c
smooth vector fx
jorgemarpa Apr 6, 2022
7648325
improved plots and docstrings
jorgemarpa Apr 6, 2022
b330ee6
machine uses PerturbationMatrix3D
jorgemarpa Apr 6, 2022
cc99962
demoving _time_bin method
jorgemarpa Apr 6, 2022
5e2de68
normalize poscorr/centr and fixing pytest to work with new perturbati…
jorgemarpa Apr 6, 2022
cceeb2b
smooth_vector API improved
jorgemarpa Apr 11, 2022
c3cdfb1
gaussian smooth -> spline smooth
jorgemarpa Apr 11, 2022
e5f3f8e
matching arguments between `perturbation` and `machine`
jorgemarpa Apr 11, 2022
84a064c
:sparkles: Added PCA method
christinahedges Apr 11, 2022
3da1557
:art: added fbpca explicitly as dependency
christinahedges Apr 11, 2022
1520001
:memo: docs
christinahedges Apr 11, 2022
612d3fd
merging from refactor-time
jorgemarpa Apr 12, 2022
78633dc
:bug: fixing pca
christinahedges Apr 12, 2022
14babe3
:bug: fix @jorgemarpa bug
christinahedges Apr 12, 2022
9d4a80f
:memo: update docstrings
christinahedges Apr 12, 2022
88c7493
merging from refactor-time
jorgemarpa Apr 12, 2022
556317d
Update src/psfmachine/perturbation.py
christinahedges Apr 12, 2022
648211e
adding perturbation-pca into machine
jorgemarpa Apr 12, 2022
e97d3f5
:sparkles: now pca has smoothed components
christinahedges Apr 12, 2022
ca3645d
improved spline and gaussian smooth
jorgemarpa Apr 12, 2022
8b4da3d
P3 -> P
jorgemarpa Apr 12, 2022
94c3aaf
hotfix
jorgemarpa Apr 12, 2022
68861a6
flake8
jorgemarpa Apr 12, 2022
0cbde46
:bug: update pca
christinahedges Apr 12, 2022
a00d69c
:art: merge
christinahedges Apr 12, 2022
18fdc55
:art: flake8
christinahedges Apr 12, 2022
de15bfc
perturbed model
jorgemarpa Apr 12, 2022
eb9ce3c
:art: no comment block
christinahedges Apr 12, 2022
2efb963
:memo: docstrings
christinahedges Apr 12, 2022
f7650e5
Merge branch 'refactor-time' of https://github.com/SSDataLab/psfmachi…
jorgemarpa Apr 12, 2022
70af6ac
time_resolution attr
jorgemarpa Apr 13, 2022
514f72b
matrix transpose hotfix
jorgemarpa Apr 13, 2022
c6ebac8
agressive bkg pixel mask
jorgemarpa Apr 13, 2022
eaa807f
:art: updating sane defaults, adding smooth PCA components
christinahedges Apr 15, 2022
e1bc28e
:art: sane defaults
christinahedges Apr 15, 2022
65ef6db
Merge branch 'refactor-time' of https://github.com/SSDataLab/psfmachi…
jorgemarpa Apr 16, 2022
9d336fb
pca smooth time scale arg visible
jorgemarpa Apr 18, 2022
ea876cc
time_resolution kwarg
jorgemarpa Apr 19, 2022
12cd2a2
using time_knots kwarg
jorgemarpa Apr 20, 2022
dc1a8e6
new time model diag plot and components API
jorgemarpa Apr 20, 2022
5aff7e9
Merge branch 'master' of https://github.com/jorgemarpa/psfmachine int…
jorgemarpa Apr 28, 2022
7ac7b71
updated lock
jorgemarpa Apr 28, 2022
1e6b8a4
pytest fixed
jorgemarpa Apr 28, 2022
90385d9
better pixel mask in build_time_model
jorgemarpa Apr 29, 2022
5b18a7e
Update pyproject.toml
jorgemarpa Apr 29, 2022
88ca62c
bump up mac version to 1.1.2, missing docstr and removed dup fx in utils
jorgemarpa Jun 3, 2022
a6612f6
docstrings fixed
jorgemarpa Jun 21, 2022
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