Move setup back to aqueduct start

[eunice-chan]

Describe your changes and why you are making these changes

Cannot run post-installation scripts when installing from wheel so moving the code back for now.

aqueduct start now starts with installation which is reflected in the logs like so:

Updating UI version to 0.0.3
Wrote version to file.
Updating server version to 0.0.3
Wrote version to file.
Downloading server binaries.
Operating system is Linux with architecture amd64.
INFO[0000] Executing query: SELECT version,dirty,name FROM schema_version ORDER BY version DESC LIMIT 1; 
...

Related issue number (if any)

Checklist before requesting a review

• I have created a descriptive PR title. The PR title should complete the sentence "This PR...".
• I have performed a self-review of my code.
• I have included a small demo of the changes. For the UI, this would be a screenshot or a Loom video.
• [N/A] If this is a new feature, I have added unit tests and integration tests.
• [N/A] I have run the integration tests locally and they are passing.
• [N/A] All features on the UI continue to work correctly.
• Added one of the following CI labels:
  • run_integration_test: Runs integration tests
  • skip_integration_test: Skips integration tests (Should be used when changes are ONLY documentation/UI)

[cw75]

@eunice-chan one nit otherwise LGTM

[cw75]

should we remove this since we are already creating this directory in line 179 and 180. Maybe change that to os.makedirs(base_directory) instead?