Ecoacoustics Audio Analysis Software v20.5.0.170

Version v20.5.0.170

Details

Compare v20.4.0.142...v20.5.0.170

• 796057e Anthony Truskinger - Makes working with test result artefacts easier
• f1f705d Anthony Truskinger - Fixes more unit tests
• 59b256e Anthony Truskinger - Fixes unit tests
• 10df97a Anthony Truskinger - Adds more extension methods to interval
• 587d645 Anthony Truskinger - Switches pdb types to portable
• c63aa6c Anthony Truskinger - Add json output for new events
• d291705 Anthony Truskinger - Fix error in docs generation script
• 9ab9c45 Anthony Truskinger - Add example scripts and documentation
• 6f4eda6 towsey - (#297) Final edits after Anthony review.
• 16bc669 Michael Towsey - Update src/AudioAnalysisTools/Events/Types/CompositeEvent.cs
• 79e8f35 Michael Towsey - Update src/AnalysisPrograms/Recognizers/Birds/BotaurusPoiciloptilus.cs
• b28d093 Anthony Truskinger - Fix spelling mistake
• 89904f9 Anthony Truskinger - Update scripting with R document
• 5cbf017 towsey - Update PteropusSpTests.cs
• deee017 towsey - (#297) Changes as part of code review.
• 35c7447 Marina D. A. Scarpelli - Update ScriptingwithR.md
• 3a47495 Marina D. A. Scarpelli - Create ScriptingwithR.md
• 7852743 Anthony Truskinger - Update indices.md
• 8ec397c towsey - (#297) Prepare config file for Koala recognizer v3
• e52411a Michael Towsey - (#297) tweak bittern recognizer
• bf2bd6f towsey - (#297) Update EventCommon.cs
• b8880db towsey - (#297) Fix methods for post-processing of whistle events
• 04c95d5 towsey - (#297) Write methods that detect acoustic activity in band above whistle
• 5fa7cfb towsey - (#297) Work on reducing false positives in whistle recognizers.
• 4fecb8c Anthony Truskinger - Update README.md
• 2ddf3fb Michael Towsey - Update Towsey.BotaurusPoiciloptilus.yml
• 09ee175 Michael Towsey - Update BotaurusPoiciloptilus.cs
• d929e75 towsey - (#297) Final tweaks to Aust Bittern recognizer
• 5d2e8cc towsey - (#297) Change type casting between event types
• e1ea09d towsey - (#297) Wirte new class EventExtensions.cs
• a11b60c towsey - (#297) Set up the Australasian Bittern recognizer
• b44b7dd towsey - (#297) Finish work on Boobook owl recognizer
• 279c487 towsey - (#297) Koala yml file
• aec2584 towsey - (#297) Create KoalaV3.cs
• e79f6e2 towsey - Create Australasian Bittern recognizer
• c90f8fc towsey - (#297) Shift more frog yml files
• 4f48746 towsey - (#297) Put frog yml files in frog folder
• 24e560c towsey - (#297) Update NinoxBoobook.cs
• d556710 towsey - (#297) Update PezoporusOccidentalis.cs
• b5e7169 towsey - (#297) Set up the boobook owl recognizer.
• 925e2ca towsey - (#297) Update Track.cs
• 66d41d0 towsey - (#297) Start work on Boobook recognizer
• acbc0d1 Anthony Truskinger - Add another test case for DrawTextSafe
• 034d396 towsey - (#297) Create NinoxBoobook.cs
• 65a980c towsey - (#297) Fix various bugs in the drawing of events on spectrograms.
• c2d3dc3 Anthony Truskinger - DrawTextSafe now accounts for kerning
• c193a38 Anthony Truskinger - Fix old mono reference
• 5afbf11 towsey - (#297) Reworked calculation of normalised score
• 5547a62 Anthony Truskinger - Switch all text rendering to draw text safe
• d69099c towsey - (#297) Update CompositeEvent.cs
• 78572a8 towsey - (#297) Fixed the drawing of labels and score bars for spectral events.
• 76573b7 towsey - (#297) Get unit tests working for spectral events
• 269edd1 towsey - (#297) Get code to build after major rework re scores and track drawing etc
• 331b713 towsey - (#297) Create four Algorithm classes for track events
• 5b351a6 Anthony Truskinger - Reverted changes to score, improved drawing methods
• e464f63 towsey - (#297) More work on calculation and normalisation of event scores.
• bca9917 towsey - (#297) Fix the normalisastion of event scores
• ffe546c Anthony Truskinger - Fixes faulty LFS file check error
• 7e4a8e9 towsey - (#297) Remove a duplicated draw method in SpectrogramTools
• fa3afbd towsey - (#297) Get tests working for drawing of Forward events.
• 20b29f0 towsey - (#297) Add methods to draw events on spectrograms
• 1b83c46 towsey - (#297) Fix unit test for darwing of SpectralEvent on spectrogram
• 6a35ba0 towsey - (#297) Get one test working for SpectralEvent class
• 45ed89d towsey - (#297) Remove old AcousticEvent constructor
• 2274b91 towsey - (#297) Create new name spaces for frog and bird recognizers.
• 9ce3db6 Anthony Truskinger - (#310) Fix build
• 30f5d30 Anthony Truskinger - Removed default docs metadata file
• 1e8e33c Anthony Truskinger - Updates docs
• 08a8645 towsey - (#297) Start work on the new Event hierarchy
• 9a97637 Anthony Truskinger - Create apMetadata.json
• 254172d Anthony Truskinger - (#313) Add docs website link 😁
• 59219a1 Anthony Truskinger - (#313) Publishes our documentation https://ap.qut.ecoacoustics.info
• 7d529e6 towsey - (#297) Miinor changes
• a76b248 towsey - (#297) Update Track.cs
• 07ac99f towsey - (#297) Update AcousticEvent.cs
• 99d3394 towsey - (#297) Fix test classes
• aaa3fa7 towsey - (#297) Iron bugs out of track extraction
• faf39a5 towsey - (#297) Correct spelling of class name
• 96a797e towsey - (#297) More work on setting up event types
• bff0696 towsey - (#297) Changes to event/track rendering
• 15cebf9 towsey - FUrther changes of method and class names
• 3f0e9c6 towsey - (#297) Create two new event typ0es
• 04a0808 towsey - Rename some of the track/event recognizers
• d0dbcf7 towsey - Update AcousticEvent.cs
• 7ea4b8c towsey - Get upwards tracks drawing correctly.
• 83eb327 towsey - (#297) Debug UnitConverters
• 1cd8412 towsey - (#297) Renamed class and methods to reflect new nomenclature
• f537c36 towsey - (#297) Getting track drawing to work after merge.
• b5d0400 towsey - (#297) Update VerticalTrackParameters.cs
• c5111ef Anthony Truskinger - (#310) [WIP] Tracks drawing tests begun
• 3663cbb towsey - (#297) Adjust unit tests to accomodate new Track hierarchy
• 1954a7d towsey - (#297) Adapt two classes to new Track hierarchy
• 728d...

Ecoacoustics Audio Analysis Software v20.4.0.142

Version v20.4.0.142

Notes

MAJOR CHANGE: Now runs on .NET Core

They way you use AnalysisPrograms will not be the same if you are on Linux
or MaxOSX. You will no longer need to install mono, or prefix commands with
mono. Please see our
installing
documentation for more details!

Details

Compare v20.2.0.99...v20.4.0.142

• 1a273de Anthony Truskinger - (#196) Adds GitHub service connection to pipelines release task
• d1629bc Anthony Truskinger - (#196) Yet another method of resolving the branch name 😪
• 1784737 Anthony Truskinger - (#196) Change git branch detection in git version script again
• 8f2315c Anthony Truskinger - (#196) Add debugging information to git version script
• 4176273 Anthony Truskinger - (#196) Debug release script
• b651940 Anthony Truskinger - (#196) Fix spelling mistake
• 1e77ebc Anthony Truskinger - Add dependency betwen release jobs
• 90e70e3 Anthony Truskinger - Add names to release jobs and change release condition to use those names
• de17dc6 Anthony Truskinger - Fix bad powershell like
• 24c0b81 Anthony Truskinger - (#196) fix line break in github credentials
• ecfd17c Anthony Truskinger - Revert changes to ACT wait/pump
• 791c44e Anthony Truskinger - Battle harden AC tests
• 6d2d3ed Anthony Truskinger - (#196) Remove redundant artifact publish step
• 4b8bd72 Anthony Truskinger - (#196) Attempt to get release stage to Work
• bd65209 Anthony Truskinger - Fixes for unit tests
• 45e6232 Anthony Truskinger - Fix bad option in publish test results
• 2fd130e Anthony Truskinger - (#169) Fix arguments for git_version script
• b1cf305 Anthony Truskinger - (#196) Adds repeat test attribute for flaky tests
• db5118a Anthony Truskinger - (#196, #196) [WIP] Add release stage to pipeline
• 53e9efb Anthony Truskinger - (#196) Attempts to save version vars for release stage
• e2a5a6b Anthony Truskinger - (#196) Try renabling AED code coverage
• 2161ce3 Anthony Truskinger - (#196) Fix bad variable
• f5f0b33 Anthony Truskinger - (#196) Fix unblanced parantheses
• 83b6d20 Anthony Truskinger - (#196) Try and enhance code coverage
• 6665101 Anthony Truskinger - (#196) Up async wait for test, remove self contianed arg for fx-dependent build
• 074e24f Anthony Truskinger - (#196) One last tweak to tests
• fd5162f Anthony Truskinger - (#196) More CI Fixes
• 7cf239a Anthony Truskinger - (#196) Fix tests for Mac CI
• 4432180 Anthony Truskinger - (#196) Add missing if to azure pipelines yaml
• de523ec Anthony Truskinger - (#196) Fix bad null literal in buid yaml
• 2a3f654 Anthony Truskinger - (#196) Removes support for MP3 for SoX on OSX
• a3091c0 Anthony Truskinger - (#196) Remove appveyor references
• e196c07 Anthony Truskinger - (#196) Bump SDK Version
• ab7f71c Anthony Truskinger - (#196) Adds LFS file checkout check to build
• da57574 Anthony Truskinger - (#196) Fix string quoting issues.
• 69f4d48 Anthony Truskinger - (#196) Adds random MP3 C libs to SoX in attempt to get it work on OSX
• dd28a84 Anthony Truskinger - (#196) Adds framework dependent build
• 8abafea Anthony Truskinger - (#196) Add extra logging to log file cleanup
• 3381ee9 Anthony Truskinger - (#196) Disabel musl tests and and more timeouts
• 50fe449 Anthony Truskinger - (#196) Attempt to get more information about failing tests
• ebfe8e8 Anthony Truskinger - (#196) Fixes runtime identifer code generation
• d32268d Anthony Truskinger - (#196) Fixes for CI and tests
• ce8b199 Anthony Truskinger - (#196) Fix mistake in azure pipeliens yml
• 7da1624 Anthony Truskinger - (#196) Ensure wavpack is installed on azure
• c8c8a09 Anthony Truskinger - (#196) Fix missing rid arguments, add fallback for rid source
• 0358b8c Anthony Truskinger - (#196) Add unit tests for missing wavpack binary
• 6d12298 Anthony Truskinger - (#196) Fix bad runtime identifer source for CheckExecutePermission test
• 4c02f91 Anthony Truskinger - (#196) Fixes issue with publish step
• 6673ed4 Anthony Truskinger - (#196) Fixes stack overflow in AED data generator
• 7a5a13e Anthony Truskinger - (#196) Fix missing arg on RuntimeIdentifierSpecificDataTestMethod
• d0f4d30 Anthony Truskinger - (#196) Add SoX install script for linux CI
• 62b0320 Anthony Truskinger - (#196) Fix style warning in SoX Audio utility
• 3c50c3c Anthony Truskinger - (#196) More cross-platform test fixes
• 9e78583 Anthony Truskinger - (#196) Fix more tests
• 14859ff Anthony Truskinger - (#196) Fix template syntax
• 0bd8eca Anthony Truskinger - (#196) Fix test, attempt different job factorization strategy
• d8cb6b4 Anthony Truskinger - (#196) Clean up solution, remove some mono refs in docs
• 7534b47 Anthony Truskinger - (#196) Fixes various cross platform issues
• 3269c78 Anthony Truskinger - (#196) Fixes tests for SelfContained/platform-specific builds
• 0ba342a Anthony Truskinger - (#196) Attempt to fix CI
• b5a43e8 Anthony Truskinger - (#196) Attempts to fix tests on linux
• 2b65564 Anthony Truskinger - (#196) Fix AED tests
• 628d95c Anthony Truskinger - (#196) Fixes ribbon plot tests
• 310b38a Anthony Truskinger - (#196) Fixes unit test with hardcoded windows path
• 0a58db5 Charles Alleman - (#196) Solved AED.Test error on test
• fbe9a78 Anthony Truskinger - (#196) Simplified path diagnostics test for directories with trailing spaces
• 894012b Charles Alleman - (#304, #196) Process extension (#304)
• 9b444ff Anthony Truskinger - (#196) Fixes stack overflow exception in ReadSpectrogram
• 25a77b2 Anthony Truskinger - (#196) Fixes process runner tests
• 11c9199 Anthony Truskinger - (#196...

Version v20.2.0.99 - QUT Ecoacoustics Workshop 2020 Version

Notes

This version of AP was bundled in the USB sticks used in the tutorial of the 2020 QUT Ecoacoustics Workshop.

IMPORTANT: This will be the last stable version of AP.exe to be released for some time. The project is changing its fundamental architecture (see #159) from the .NET Framework to .NET Core.

After this point, mono will no longer be required to use AP.exe on Mac and Linux and instead, standalone platform-independent packages will be produced.

This will be an exciting time for us but be wary, there will be dragons ahead.

Details

Compare v19.12.0.1...v20.2.0.99

• 8bc9008 Anthony Truskinger - Adds useful defaults to ConcatenateIndexFiles command
• ae7501e Anthony Truskinger - No not do appconfig name check on mono
• 398bd4f Michael Towsey - Update UseModel.cs
• c39bb95 Anthony Truskinger - Updated default BlueEnhanceParameter in Towsey.Acoustic.yml
• 08cb0fe Michael Towsey - Work on the harmonic recognizer
• 4571c2d Michael Towsey - a little work on harmonic recognizer
• 4955f30 Michael Towsey - Update ConcatenationTests.cs
• 1dfaa92 Michael Towsey - Get Generic recognizer tests working
• 39e6a38 Michael Towsey - Set up config for doing test of GenericRecognizers
• f9d4f9d Michael Towsey - Work on Harmonic and Whistle recognizers
• 9511e91 Michael Towsey - Work on Whistle recognizer
• feb72a0 towsey - Change config files
• 5c99a19 towsey - Start on Oscillation recognizer
• 21f89d3 Anthony Truskinger - Fixes window overlap calculation for generic recognizer
• 5b1e400 Anthony Truskinger - Improves method of registering yaml tag types
• 072bfcf towsey - Change two config file names
• 5a37019 Anthony Truskinger - Ensures GenericRecognizerConfig static constructor is invoked
• 4b6a453 towsey - Update LDSpectrogramRGB.cs
• 663b9ef Anthony Truskinger - Finished Generic recognizer and tests
• 00086b0 Anthony Truskinger - [WIP] Finished rewwriting generic recognizer
• a2db97a Anthony Truskinger - [WIP] Refactoring generic recognizer
• 262dde4 Michael Towsey - insert configs into generic recogniser classes
• 0d255d4 Michael Towsey - Set up classes
• 2bfa889 Michael Towsey - Set up Generic recognizers
• c5ab40d Michael Towsey - Conflict resolution
• 701b905 Michael Towsey - Updated image sharp packages
• 66d3cae towsey - Update ConcatenateIndexFiles.cs
• 1e0079e towsey - Attempt to fix bug in UseModel.cs
• 59672cc towsey - Read parameters from the config.yml file.
• 996d564 towsey - Try versions of difference spectrogram
• b1ba0c8 towsey - Enable recording name to be passed to spectrograms.
• 664597a towsey - Set up generation of Cepstral spectrogram.
• 0bf4f6c towsey - Create Towsey.SpectrogramGenerator.yml
• 3c544d9 towsey - Add TODO notes to two classes
• 5752c02 towsey - Replace config dictionary with typed dictionary
• de70d9b towsey - Add back second time scale to spectrograms.
• 85f32ce towsey - Trial removal of obsolete class
• 99c4bfc towsey - Get four spectrograms displaying correctly
• 8bbd872 towsey - Further work to get more spectrograms
• 9e72c71 towsey - Get Waveform image working.
• d39e982 towsey - Refactor the method to produce spectrograms
• 1c26d46 towsey - Fix unit tests
• 18c7bb6 towsey - Made correction of blue colour an optional parameter
• e69360f towsey - Adjusted display of indices rendered in blue.
• 9e52326 towsey - Update LDSpectrogramRGB.cs
• 9ad5c90 towsey - Work done by Anthony to implement a new Results class for 6 indices.
• 376a503 towsey - Update UseModel.cs
• 7a0364f towsey - Update Sandpit.cs
• e095850 towsey - Add testing capcability to the Build/Make templates.
• d9db4ae towsey - Implement entry point for building content description models
• c15800b Michael Towsey - Create new SpectralIndexvalues class
• c342e0b Michael Towsey - Shift Content description analysis to main analysis loop
• 79f939b Michael Towsey - Update Towsey.TemplateDefinitions.json
• be0abf9 Anthony Truskinger - Code review for content description
• 89355ce Michael Towsey - add documentation
• c8f2251 Michael Towsey - Update TemplateManifest.cs
• e1465f5 Michael Towsey - Delete unnecesary files
• 129fb7f towsey - Fix up ContentSignatures.cs
• 51b29d8 towsey - derive more params from config file
• b8a84bc towsey - Access params from the config.yml file
• 9c13b79 towsey - Finally get content description working in IAnalyzer2 environment.
• 516abf0 towsey - integrating Content Descirption into IAnalyzer2.
• a52c9b0 towsey - Content description now works using IAnalyzer2
• b3e568e towsey - Set up IAnalyzer2 system ready for Content description
• d765d94 towsey - More work on content description
• e7a4052 towsey - Set up class to calculate only six spectral indices
• 42b429a towsey - Set up Content Description as IAnalyzer2.
• 17a56e3 towsey - Testing that manifest to tesmplates works
• 82f0329 towsey - resharper stuff
• a1fbbc9 towsey - Improve score normalisation
• d471feb towsey - Experiment with different score normalisations
• 7f1c504 towsey - Complete refactoring of code to separate manifests from template definitions.
• d683f11 towsey - Set up Json reading and writing of template files
• 6bd20d2 towsey - Issue #252 Refactor code as per Anthony suggestions
• cb7f80a towsey - Work on template creation
• 418032d towsey - Issue #252 Start work on template editing
• 1b8e776 towsey - Start work on Template Creation
• 1ac77f0 towsey - Issue #252 Finalise three content algoithms
• 0132e83 towsey - Issue #252 Set up new data structures for content description
• 6a319be towsey - Added visualisation methods to Plot.cs
• e5645d1 towsey - Created DataProcessing class plus two new test classes
• 7747fd5 towsey - Add another way of calculating distance
• 45aeb8b towsey - Set up two new content types, Morning Chorus and Silver Eye
• 2e4c4c1 towsey - Set up new classes to recognise acoustic types
• c2ec082 towsey - Set up wind and rain detection methods
• d2511f4 towsey - Building more of code structure for content descirption
• 4847c10 towsey - Continue setting up Content description framework.
• 99a27ff towsey - Set up methods for validating the output from content description classes
• d1d9f9f towsey - Write methods to read in acoustic index spectrograms.
• 857b9f7 towsey - Set up ConentDescription project

Ecoacoustics Audio Analysis Software v19.12.0.1

Version v19.12.0.1

Compare v19.12.0.5...v19.12.0.1

• b93a667 towsey - Changes to standard spectrogram config file

Ecoacoustics Audio Analysis Software v19.12.0.5

Version v19.12.0.5

Compare v19.11.1.1...v19.12.0.5

• b45652f towsey - Update TestAnalyzeLongRecording.cs
• 1907094 towsey - Fix five more broken tests
• 4dd38e0 towsey - Removed references to R3D identified by Anthony
• 96354c9 towsey - removed calculation of R3D

Ecoacoustics Audio Analysis Software v19.11.1.1

Version v19.11.1.1

Compare v19.11.0.30...v19.11.1.1

• 781d0a3 towsey - Update Sandpit.cs

Ecoacoustics Audio Analysis Software v19.11.0.30

Version v19.11.0.30

Compare v19.10.0.5...v19.11.0.30

• 33c5094 Michael Towsey - Issue-#238 Fix failed tests for flying fox
• cc8b834 Anthony Truskinger - Update CONTRIBUTING.md
• 856da7a Michael Towsey - Fixed unit test
• 0a5ec7d Michael Towsey - Update AcousticComplexityIndex.cs
• b31598b towsey - More work on Oscillation recognizer
• a0e643b towsey - Reworking the oscillation detection component of Flying Foxrecognizer
• e807743 towsey - Update PulseTrain.cs
• 1228ff3 towsey - Update SonogramTests.cs
• 1228b46 towsey - Finish Unit tests for Flying FOx class
• 70caaaf towsey - Update SonogramTests.cs
• 2f8947d towsey - More work on Pteropus recogniser tests
• 93cb93b towsey - More work on FlyingFox tests
• 67e023b towsey - Set up unit tests for the flying fox recogniser
• 03a304d towsey - More changes to FF code
• 1d1c552 towsey - Finished response to requests from Anthony
• 877703f towsey - Responding to comments from Anthony
• 10ad62a towsey - Fine adjustment of parameters
• 23429bd towsey - Update PteropusSpecies.cs
• 007d150 towsey - Attempt to implement pulase train detection
• 6e6cce8 towsey - Add wingbeat profile to Flying Fox
• 7a2c5e1 towsey - Penultimate work on FF recogniser
• 5e5016e towsey - Refactor acoustic events method
• a07ae44 towsey - cleaned up the PreopusSpecies class
• 3a5db0a towsey - New method to find events
• d8813c2 towsey - Further work on the flying fox recogniser.
• d7ac462 Michael Towsey - Begin work on flying fox recogniser
• 3f24758 towsey - Set up Flying Fox Recogniser classes
• 56c0725 towsey - Projects & Packages required to get recogniser working

Ecoacoustics Audio Analysis Software v19.10.0.5

Version v19.10.0.5

Compare v19.10.0.3...v19.10.0.5

• e96fb1e dependabot-preview[bot] - Bump Microsoft.Extensions.FileProviders.Physical
• 733ef00 dependabot-preview[bot] - Bump System.Diagnostics.DiagnosticSource from 4.3.0 to 4.6.0
• 2d51909 dependabot-preview[bot] - Bump xunit.extensibility.core from 2.2.0 to 2.4.1
• 4164f40 dependabot-preview[bot] - Bump SixLabors.ImageSharp.Drawing from 1.0.0-beta0007 to 1.0.0-dev000893
• e6a208d dependabot-preview[bot] - Bump Zio from 0.3.6 to 0.7.4

Ecoacoustics Audio Analysis Software v19.10.0.3

Version v19.10.0.3

Compare v19.9.2.18...v19.10.0.3

• bea4285 Anthony Truskinger - Allow fo detection of AudioMoth dates in result file names
• ce28732 Anthony Truskinger - Added FxCopAnalyzers package
• 3657e16 Anthony Truskinger - Added support for parsing AudioMoth V1 dates

Ecoacoustics Audio Analysis Software v19.9.2.18

Version v19.9.2.18

Compare v19.9.1.3...v19.9.2.18

• ea59702 Anthony Truskinger - Fix syntax error from merge conflict
• ded36f9 towsey - Update ACI.bin
• 2c4599a towsey - Fix problem ACI value in top freq bin
• 53def22 towsey - Fix Unit tests for Concatenation
• 498c468 towsey - More experiments with rendering of zooming spectrograms
• 37cf217 towsey - Experiment with combined BGN index
• b8b39aa towsey - Check zooming spgm code is working OK
• 2c6578b Michael Towsey - Fix ColourMap weightings
• f9ed53d Michael Towsey - Work on ZoomTiledSpectrograms
• 3f9fe4f Michael Towsey - new method to load index matrices
• 4c55275 Michael Towsey - Shift directory SearchOption one level higher
• 1d78306 Michael Towsey - Edit code to adjust to config changes
• b6f64ca Michael Towsey - edit IndexProperties files
• 52cc26e Michael Towsey - Fix treatment of degenerate distributions
• d2e3377 Michael Towsey - Experiments with concatenate
• 9f3455c Michael Towsey - Deleted config files no longer relevant