Code

Support complex-valued dwidenoising#679

Code

Merged

mattcieslak merged 28 commits intoPennLINC:masterPennLINC/qsiprep:masterfrom tsalo:phasetsalo/qsiprep:phaseCopy head branch name to clipboardFeb 29, 2024

+575-115

Commits

Commits on Jan 24, 2024

• Limit DWI data to magnitude and collect phase sep.

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  56772f6

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• Draft steps to do complex dwidenoise.

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  f1bea5f

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• Feed in dwidenoisecomplex throughout package.

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  3d6b10d

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• Fix up some interfaces.

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  3d1ce20

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Commits on Jan 25, 2024

• Fix BIDSDataGrabber.

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  a6bc0a3

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• Keep working.

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• Add docstrings.

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• Grab phase within init_merge_and_denoise_wf.

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• Simplify boilerplate.

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• Remove unused phase_available.

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Commits on Jan 26, 2024

• Use layout to get file's metadata.

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• Merge remote-tracking branch 'upstream/master' into phase

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• Merge remote-tracking branch 'upstream/master' into phase

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Commits on Jan 28, 2024

• Merge remote-tracking branch 'upstream/master' into phase

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  ddea10e

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Commits on Jan 29, 2024

• Fix connection in phase denoising.

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  2aef726

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• Generate out_file names in interfaces.

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  39c50ff

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Commits on Jan 30, 2024

• Reduce memory usage of PhaseToRad interface.

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Commits on Feb 2, 2024

• Merge remote-tracking branch 'upstream/master' into phase

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  16aeb98

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Commits on Feb 7, 2024

• Use updated conversion code.

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Commits on Feb 12, 2024

• Merge remote-tracking branch 'upstream/master' into phase

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• Merge remote-tracking branch 'upstream/master' into phase

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  f155c35

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• Merge remote-tracking branch 'upstream/master' into phase

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  d9c8bdb

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• Fix imports.

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Commits on Feb 22, 2024

• Merge remote-tracking branch 'upstream/master' into phase

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  3d3588f

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• Rerun black and isort.

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Commits on Feb 28, 2024

• Merge remote-tracking branch 'upstream/master' into phase

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  30aab41

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Commits on Feb 29, 2024

• Update docstrings to reflect Nipreps licensing.

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  ae8acc7

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• Strict phase file matching.

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