remove protein evidences endpoint

PRIDE-Archive · Sep 25, 2024 · 4535aef · 4535aef
1 parent 2805e22
commit 4535aef
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diff --git a/protein/__init__.py b/protein/__init__.py
diff --git a/protein/protein.py b/protein/protein.py
diff --git a/tests/test_search.py b/tests/test_search.py
@@ -3,7 +3,6 @@
 from files.files import Files
 from peptide.peptide import Peptide
 from project.project import Project
-from protein.protein import Protein
 
 
 class TestSearch(TestCase):
@@ -39,37 +38,6 @@ def test_search_projects(self):
                                                         "submission_date")
         assert len(result['_embedded']['compactprojects']) == 1
 
-    def test_protein_evidences(self):
-        """
-        A test method to search protein evidences
-        """
-        search = Protein()
-
-        result = search.protein_evidences("PXD019134", "", "", 100, 0, "ASC", "projectAccession")
-        assert result['page']['totalElements'] == 144176
-
-        result = search.protein_evidences("PXD019134", "123531", "CYSP2_HAECO", 100, 0, "ASC", "projectAccession")
-        assert len(result['_embedded']['proteinevidences']) == 1
-
-#     def test_spectra_evidences(self):
-#         """
-#         A test method to search spectra evidences
-#         """
-#         search = Spectra()
-#
-#         result = search.spectra_evidences("mzspec:PXD019317:sh_5282_HYK_101018_Mac_D_25mM.mzML:scan:39507:TK["
-#                                           "MS:1001460]PFR/2", "", "", "", "", "COMPACT", 100, 0, "ASC",
-#                                           "projectAccession")
-#         assert len(result['_embedded']['spectraevidences']) == 1
-#
-#         result = search.spectra_evidences("mzspec:PXD019317:sh_5282_HYK_101018_Mac_D_25mM.mzML:scan:39507:TK["
-#                                           "MS:1001460]PFR/2" + "\\n" +
-#                                           "mzspec:PXD019317:sh_5282_HYK_101018_Mac_D_25mM.mzML:scan"
-#                                           ":10138:YAAMVTC[UNIMOD:4]MDEAVRNITWALKR/3", "",
-#                                           "", "", "", "COMPACT", 100, 0,
-#                                           "ASC", "projectAccession")
-#         assert len(result['_embedded']['spectraevidences']) == 2
-#
     def test_peptide_evidences(self):
         """
         A test method to search peptide evidences