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getEventConceptId.r
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getEventConceptId.r
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#' @title Get All Concept_ids In All Event Tables.
#'
#' @description This function gets the unique concept_ids in all event tables.
#'
#' @param connectionDetails An R object of type\cr\code{connectionDetails} created using the
#' function \code{createConnectionDetails} in the
#' \code{DatabaseConnector} package.
#'
#' @param cdmSchema The name of the database schema that contains the CDM.
#' Requires read and write permissions to this database. On SQL
#' Server, this should specify both the database and the schema,
#' so for example 'cdm_instance.dbo'.
#' @param cdmVersion The version of your CDM. Currently "5.3.1" and "5.4.0".
#'
#'@export
getEventConceptId <-
function(connectionDetails, cdmSchema, cdmVersion)
{
if (cdmVersion == "5.3.1")
sqlFilePath <- "cdm_version/v531"
else if (cdmVersion == "5.4.0")
sqlFilePath <- "cdm_version/v540"
else
stop("Unsupported CDM specified. Supported CDM versions are \"5.3.1\" and \"5.4.0\"")
sql <- SqlRender::loadRenderTranslateSql(
sqlFileName = paste0(sqlFilePath, "/get_event_concept_id.sql"),
packageName = "ETLSyntheaBuilder",
dbms = connectionDetails$dbms,
cdm_schema = cdmSchema
)
conn <- DatabaseConnector::connect(connectionDetails)
eventConceptId <- DatabaseConnector::querySql(conn, sql)
on.exit(DatabaseConnector::disconnect(conn))
eventConceptId
}