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There also is a problem that multiple different Estimated glomerular filtration rates exist (mdrd, mayo, african-american, non-african-american), and while the non-african-american is mapped maybe correctly (concept: 3049187) in the NLPM file, all the other ones are mapped to the wrong one as above.
Additionally, they also need to be correctly moved to the Labs section.
We can hopefully resolve these concept_ids.
Regards
Aditya
The text was updated successfully, but these errors were encountered:
Hello,
It looks like the lab test for eGFR (note the capitalisation - expanded to Estimated glomerular filtration rate) is mapped to Epidermal Growth Factor Receptor (EGFR; concept_id 3040084) in the lab names file (https://github.com/OHDSI/ETL-LambdaBuilder/blob/master/docs/OPTUM_PANTHER/Vocab%20Updates/JNJ_OPTUM_EHR_LABNAM.txt) as well as the NLPM file (https://github.com/OHDSI/ETL-LambdaBuilder/blob/master/docs/OPTUM_PANTHER/Vocab%20Updates/JNJ_OPTUM_EHR_NLPM.txt). This presents a problem of overwriting, and all eGFR tests need a separate one.
There also is a problem that multiple different Estimated glomerular filtration rates exist (mdrd, mayo, african-american, non-african-american), and while the non-african-american is mapped maybe correctly (concept: 3049187) in the NLPM file, all the other ones are mapped to the wrong one as above.
Additionally, they also need to be correctly moved to the Labs section.
We can hopefully resolve these concept_ids.
Regards
Aditya
The text was updated successfully, but these errors were encountered: