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Merged
merged 3 commits into from
Aug 19, 2024
Merged

To v1.3.7 & use jnml v0.13.3 #417

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1185590
To v1.3.7
pgleeson Aug 19, 2024
944bf05
Tweak to xpp export for greater xpp version compatibility
pgleeson Aug 19, 2024
79eea48
Use jnml v0.13.3
pgleeson Aug 19, 2024
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2 changes: 1 addition & 1 deletion pyneuroml/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@
__version__ = importlib_metadata.version("pyNeuroML")


JNEUROML_VERSION = "0.13.2"
JNEUROML_VERSION = "0.13.3"

# Define a logger for the package
logging.basicConfig(
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Binary file removed pyneuroml/lib/jNeuroML-0.13.1-jar-with-dependencies.jar
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Binary file renamed ...jNeuroML-0.13.2-jar-with-dependencies.jar → ...jNeuroML-0.13.3-jar-with-dependencies.jar
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5 changes: 4 additions & 1 deletion pyneuroml/xppaut/__init__.py
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Expand Up @@ -250,10 +250,13 @@ def substitute_functions(expr, functions):
def to_xpp(data, new_xpp_filename):
xpp_ode = ""

from pyneuroml import __version__
xpp_ode += "\n## XPP export from pyNeuroML v%s\n"%__version__

xpp_ode += "\n# Parameters\n"
for k, v in data["parameters"].items():
if k not in INBUILT.keys():
xpp_ode += f"par {k} = {v}\n"
xpp_ode += f"par {k}={v}\n"

xpp_ode += "\n# Functions\n"
for k, v in data["functions"].items():
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2 changes: 1 addition & 1 deletion setup.cfg
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@@ -1,6 +1,6 @@
[metadata]
name = pyNeuroML
version = 1.3.6
version = 1.3.7
author = Padraig Gleeson
author_email = [email protected]
url = https://github.com/NeuroML/pyNeuroML
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