Merge pull request #202 from NeuralEnsemble/feat-metrics-handle-cell-… #404
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name: Regenerate nml.py | |
on: | |
push: | |
branches: [ master, development, experimental ] | |
pull_request: | |
branches: [ master, development, experimental ] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
sudo apt-get update -y | |
sudo apt-get install libhdf5-serial-dev liblzo2-dev libgraphviz-dev -y | |
python -m pip install --upgrade pip | |
pip install .[dev] | |
- name: Rebuild nml.py | |
run: | | |
cd neuroml/nml && rm -f nml.py && ./regenerate-nml.sh -a | |
- name: Build package | |
run: | | |
pip install .[full] | |
- name: Test with pytest | |
run: | | |
pytest | |
- name: Run examples | |
run: | | |
cd ./neuroml/examples && python run_all.py | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics |