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NaotoKubota/README.md

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  • 👋 Hi, I’m @NaotoKubota, a postdoc at UC Riverside
  • 👀 I’m interested in computational genomics and transcriptomics
  • 🌱 I’m currently studying RNA splicing regulation in the mammalian brain
  • 📫 How to reach me: naotok at ucr.edu

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  1. Sika-Zheng-Lab/Shiba Sika-Zheng-Lab/Shiba Public

    A versatile method for systematic identification of differential RNA splicing across platforms

    Python 3 3

  2. Sika-Zheng-Lab/shiba2sashimi Sika-Zheng-Lab/shiba2sashimi Public

    A utility for creating sashimi plot from Shiba output

    Python 1

  3. ngsfetch ngsfetch Public

    Fast retrieval of metadata and fastq files with ffq and aria2

    Python 1

  4. SnakeNgs SnakeNgs Public

    Snakemake workflows for NGS data processing

    Python 1

  5. SnakePolyester SnakePolyester Public

    Snakemake workflow for simulating RNA-seq reads by Polyester

    Python